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dasL1_008_000M1_maxbin2_maxbin_110_fasta_sub_fa

L1_008_000M1_public_Firmicutes_44_7
In projects: L1_008_000M1_public

Consensus taxonomy: Firmicutes  →  Bacteria

Metagenomic Context

Parent: L1_008_000M1_public_UNK

Properties

Avg. coverage: 6.79 Longest contig: 19.02 Kbp Bin length: 2.53 Mbp GC content: 44.35 %
Contigs count: 756 Features count: 2745 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 28 / 55 MC: 2 BSCG 32 / 51 MC: 3 ASCG 10 / 38 MC: 2
Displaying items 601-650 of 756 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L1_008_000M1_scaffold_25746
Species: Paenibacillus sp. FSL P4-0081 (50%)
2 1850 bp 44.32 5.11 97.62
L1_008_000M1_scaffold_56619
Species: [Clostridium] clariflavum (50%)
2 1006 bp 45.63 2.09 63.52
L1_008_000M1_scaffold_15396 2 2786 bp 42.86 5.38 98.53
L1_008_000M1_scaffold_11524 2 3508 bp 39.48 5.47 99.63
L1_008_000M1_scaffold_55053 2 1724 bp 40.20 5.31 100.06
L1_008_000M1_scaffold_9037
Species: Paenibacillus sp. FSL R7-0273 (50%)
2 4299 bp 43.52 4.50 99.09
L1_008_000M1_scaffold_29797
Species: [Clostridium] asparagiforme (50%)
2 1651 bp 44.76 5.09 88.13
L1_008_000M1_scaffold_11014 2 3647 bp 43.02 5.02 99.37
L1_008_000M1_scaffold_41728
Species: Clostridium sp. CAG:352 (50%)
2 1276 bp 40.36 5.53 88.17
L1_008_000M1_scaffold_30872
Species: Alistipes putredinis CAG:67 (100%)
2 1606 bp 44.83 4.11 64.63
L1_008_000M1_scaffold_38122
Species: Roseburia intestinalis CAG:13 (50%)
2 1369 bp 41.86 3.83 74.73
L1_008_000M1_scaffold_53069
Species: BJP_IG2157_Clostridiales_35_16 (50%)
2 1059 bp 47.31 3.68 49.01
L1_008_000M1_scaffold_57236 2 1382 bp 42.33 5.43 88.78
L1_008_000M1_scaffold_42351
Species: Paenibacillus graminis (50%)
2 1262 bp 36.93 3.68 75.36
L1_008_000M1_scaffold_55064
Species: Subdoligranulum sp. CAG:314 (100%)
2 1028 bp 47.67 2.63 68.00
L1_008_000M1_scaffold_22777
Species: Clostridium sp. CAG:43 (50%)
2 2494 bp 41.78 5.41 69.77
L1_008_000M1_scaffold_36569
Species: Alistipes indistinctus (50%)
2 1411 bp 48.62 6.59 72.71
L1_008_000M1_scaffold_24163
Species: Bacillus cereus (50%)
2 1941 bp 41.63 5.72 89.80
L1_008_000M1_scaffold_45732
Species: Firmicutes bacterium CAG:41 (50%)
2 1189 bp 39.61 5.30 77.46
L1_008_000M1_scaffold_23141 2 2010 bp 46.42 5.52 96.27
L1_008_000M1_scaffold_48983
Species: Faecalibacterium prausnitzii (50%)
2 1127 bp 44.19 4.92 94.23
L1_008_000M1_scaffold_42872
Species: Alistipes putredinis (100%)
2 1250 bp 42.32 4.32 68.64
L1_008_000M1_scaffold_39520
Species: Firmicutes bacterium CAG:41 (50%)
2 1331 bp 43.95 7.44 96.02
L1_008_000M1_scaffold_35681
Species: Alistipes sp. CAG:53 (50%)
2 1437 bp 49.55 4.80 97.08
L1_008_000M1_scaffold_52265
Species: Alistipes shahii (50%)
2 1071 bp 47.71 5.32 61.90
L1_008_000M1_scaffold_46890
Species: GWC2_Clostridiales_40_7_curated (50%)
2 1167 bp 41.56 4.76 98.97
L1_008_000M1_scaffold_26867
Species: Desulfosporosinus youngiae (50%)
2 1790 bp 42.57 6.54 65.36
L1_008_000M1_scaffold_12571
Species: Clostridium sp. ATCC 29733 (50%)
2 3268 bp 41.22 4.82 97.12
L1_008_000M1_scaffold_51981
Species: Alistipes finegoldii CAG:68 (50%)
2 1075 bp 49.30 3.07 35.44
L1_008_000M1_scaffold_27237
Species: Clostridium sp. CAG:678 (50%)
2 1773 bp 44.39 4.65 94.08
L1_008_000M1_scaffold_38912
Species: Lachnospiraceae bacterium 2_1_46FAA (50%)
2 1346 bp 48.44 6.58 100.74
L1_008_000M1_scaffold_52528
Species: Bilophila sp. 4_1_30 (100%)
2 1067 bp 49.86 4.22 43.30
L1_008_000M1_scaffold_25009
Species: Lachnospiraceae bacterium 1_4_56FAA (50%)
2 2517 bp 44.46 5.48 92.61
L1_008_000M1_scaffold_29314
Species: Coprococcus sp. CAG:131 (50%)
2 1674 bp 44.38 3.49 96.24
L1_008_000M1_scaffold_26362
Species: CG_Arma_02 (50%)
2 1816 bp 44.66 5.53 97.80
L1_008_000M1_scaffold_54563
Species: Subdoligranulum sp. 4_3_54A2FAA (50%)
2 1036 bp 45.85 3.47 56.76
L1_008_000M1_scaffold_47051 2 1164 bp 49.83 4.12 100.00
L1_008_000M1_scaffold_24180
Species: Lachnospiraceae bacterium 3_1_57FAA_CT1 (50%)
2 1940 bp 44.69 4.56 68.51
L1_008_000M1_scaffold_29062
Species: Firmicutes bacterium CAG:41 (50%)
2 1684 bp 37.11 5.34 73.57
L1_008_000M1_scaffold_10230
Species: Hungatella hathewayi (50%)
2 3876 bp 43.11 5.65 98.92
L1_008_000M1_scaffold_20776
Species: Ruminococcus lactaris (50%)
2 2190 bp 42.88 5.75 90.00
L1_008_000M1_scaffold_30392 2 1626 bp 42.99 4.61 86.72
L1_008_000M1_scaffold_36848
Species: Eubacterium ramulus (50%)
2 1402 bp 48.22 4.07 85.16
L1_008_000M1_scaffold_32809
Species: Bacteroides clarus (50%)
2 1533 bp 50.95 2.94 67.51
L1_008_000M1_scaffold_42890
Species: Firmicutes bacterium CAG:41 (50%)
2 1250 bp 42.56 5.16 96.48
L1_008_000M1_scaffold_16050 2 2691 bp 42.03 5.24 97.99
L1_008_000M1_scaffold_11819
Species: human gut metagenome (50%)
2 3436 bp 42.08 5.06 98.40
L1_008_000M1_scaffold_48748
Species: Firmicutes bacterium CAG:94 (50%)
2 1131 bp 45.36 3.71 55.70
L1_008_000M1_scaffold_11308 2 3565 bp 43.00 4.96 98.96
L1_008_000M1_scaffold_54572
Species: Subdoligranulum sp. CAG:314 (100%)
2 1036 bp 50.68 3.47 57.63
Displaying items 601-650 of 756 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.