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L1_008_000M1_scaffold_1591

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1591_1
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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220..1977
DNA (1758bp) protein (586aa)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Roseburia sp. CAG:309 RepID=R6YLA6_9FIRM
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:CDD34625.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
single-stranded-DNA-specific exonuclease RecJ
L1_008_000M1_scaffold_1591_2
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1989..2957
DNA (969bp) protein (323aa)
Glycosyl transferase family 2 n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z154_9FIRM
Glycosyl transferase family 2 {ECO:0000313|EMBL:CDD34626.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
glycosyl transferase family protein
L1_008_000M1_scaffold_1591_3
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2975..3904
DNA (930bp) protein (310aa)
MoxR-like ATPases (EC:3.6.3.-)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZVX5_9FIRM
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:CDD34627.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_1591_4
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3892..4902
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YF50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34628.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1591_5
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4921..7221
DNA (2301bp) protein (767aa)
Transglutaminase-like protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YTA2_9FIRM
Transglutaminase-like protein {ECO:0000313|EMBL:CDD34629.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1591_6
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7368..8171
DNA (804bp) protein (268aa)
Conserved domain protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YGD1_9FIRM
Conserved domain protein {ECO:0000313|EMBL:CDD35038.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1591_7
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8642..10252)
DNA (1611bp) protein (537aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z158_9FIRM
L1_008_000M1_scaffold_1591_8
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10524..12536
DNA (2013bp) protein (671aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Clostridium sp. CAG:62 RepID=R7C904_9CLOT
ATP-dependent metalloprotease FtsH
L1_008_000M1_scaffold_1591_9
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12475..13266
DNA (792bp) protein (264aa)
HAD-superfamily hydrolase subfamily IIB n=1 Tax=Roseburia sp. CAG:309 RepID=R6YF52_9FIRM
HAD-superfamily hydrolase subfamily IIB {ECO:0000313|EMBL:CDD34633.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
HAD-superfamily hydrolase, subfamily IIB
L1_008_000M1_scaffold_1591_10
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13285..15150
DNA (1866bp) protein (622aa)
UvrABC system protein C n=1 Tax=Roseburia sp. CAG:309 RepID=R6YTA9_9FIRM
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
excinuclease ABC, C subunit
L1_008_000M1_scaffold_1591_11
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15161..16537)
DNA (1377bp) protein (459aa)
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YLB7_9FIRM
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase {ECO:0000313|EMBL:CDD34635.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Beta-N-acetylglucosaminidase
L1_008_000M1_scaffold_1591_12
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16645..17967
DNA (1323bp) protein (441aa)
Amino acid carrier protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z161_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:CDD34636.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
sodium:alanine symporter
L1_008_000M1_scaffold_1591_13
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18073..19128
DNA (1056bp) protein (352aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZVY4_9FIRM
L1_008_000M1_scaffold_1591_14
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19161..19601
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YF56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34638.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1591_15
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19598..20434
DNA (837bp) protein (279aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C976_9CLOT
L1_008_000M1_scaffold_1591_16
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20437..20760
DNA (324bp) protein (108aa)
Thioredoxin n=1 Tax=Roseburia sp. CAG:309 RepID=R6YJC3_9FIRM
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
thioredoxin
L1_008_000M1_scaffold_1591_17
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20834..21028)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZZX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD36032.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
Displaying 17 items

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