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L1_008_000M1_scaffold_2083

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_2083_1
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..340
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AMH9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI67049.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
lipoprotein
L1_008_000M1_scaffold_2083_2
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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387..584
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B495_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI67050.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L1_008_000M1_scaffold_2083_3
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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969..1160
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CI73_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI67051.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L1_008_000M1_scaffold_2083_4
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1201..1449)
DNA (249bp) protein (83aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=U2CCR0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI67052.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L1_008_000M1_scaffold_2083_5
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(1733..2512)
DNA (780bp) protein (260aa)
Bacterial group 2 Ig-like protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B1R1_9FIRM
Bacterial group 2 Ig-like protein {ECO:0000313|EMBL:CCX45386.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
40-residue YVTN family beta-propeller repeat-containing protein
L1_008_000M1_scaffold_2083_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2637..3956)
DNA (1320bp) protein (440aa)
Germination protein YpeB n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YLE0_9FIRM
Germination protein YpeB {ECO:0000313|EMBL:KGF56223.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ypeB; Sporulation protein ypeB
L1_008_000M1_scaffold_2083_7
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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comp(4033..5508)
DNA (1476bp) protein (492aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IAI3_9FIRM
L1_008_000M1_scaffold_2083_8
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

5666..6676
DNA (1011bp) protein (337aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=2 Tax=root RepID=R5APU0_9FIRM
L1_008_000M1_scaffold_2083_9
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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6744..7856
DNA (1113bp) protein (371aa)
Glycosyltransferase group 4 family n=3 Tax=root RepID=R5B1R6_9FIRM
Glycosyltransferase group 4 family {ECO:0000313|EMBL:CCX45391.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosamine-1-phosphate transferase
L1_008_000M1_scaffold_2083_10
unknown

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comp(7864..8187)
DNA (324bp) protein (108aa)

This feature has no annotations

L1_008_000M1_scaffold_2083_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8177..8536)
DNA (360bp) protein (120aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YLE8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM54813.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L1_008_000M1_scaffold_2083_12
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

Not on your lists

comp(8533..8775)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CUW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX71663.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
L1_008_000M1_scaffold_2083_13
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

Not on your lists

8801..9295
DNA (495bp) protein (165aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
Ser/Thr protein phosphatase family protein n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5D453_9FIRM
phosphoesterase, MJ0936 family
L1_008_000M1_scaffold_2083_14
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9274..10434
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AQW5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX41541.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
acyltransferase 3
L1_008_000M1_scaffold_2083_15
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10431..11075
DNA (645bp) protein (215aa)
Chloramphenicol O-acetyltransferase {ECO:0000313|EMBL:EET58572.1}; EC=2.3.1.28 {ECO:0000313|EMBL:EET58572.1};; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Chloramphenicol O-acetyltransferase n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LLE9_9FIRM
chloramphenicol acetyltransferase
L1_008_000M1_scaffold_2083_16
Pyramidobacter piscolens, Pyramidobacter, Synergistales, Synergistia, Synergistetes, Bacteria

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11231..12091
DNA (861bp) protein (287aa)
Transcriptional regulator, MerR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y1I4_9BACT
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EFB91861.1}; TaxID=352165 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Pyramidobacter.;" source="Pyramidobacter piscolens W5455.;"
MerR family transcriptional regulator
L1_008_000M1_scaffold_2083_17
Pyramidobacter piscolens, Pyramidobacter, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

12174..13196
DNA (1023bp) protein (341aa)
Dihydrodipicolinate reductase domain protein {ECO:0000313|EMBL:EFB91860.1}; EC=1.17.1.8 {ECO:0000313|EMBL:EFB91860.1};; TaxID=352165 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Pyramidobacter.;" source="Pyramidobacter piscolens W5455.;"
Dihydrodipicolinate reductase domain protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y1I3_9BACT
dihydrodipicolinate reductase
L1_008_000M1_scaffold_2083_18
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13338..14138)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JRK8_CELLD
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR03551.1}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
hypothetical protein
L1_008_000M1_scaffold_2083_19
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14166..14672)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. AE2015 RepID=UPI0003B510F5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL35658.1}; TaxID=515622 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316); (Clostridium proteoclasticum).;"
L1_008_000M1_scaffold_2083_20
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14863..15795)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) RepID=E0RVX9_BUTPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL35661.1}; TaxID=515622 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316); (Clostridium proteoclasticum).;"
L1_008_000M1_scaffold_2083_21
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15828..16481)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. AE3009 RepID=UPI0003B42142
TetR family transcriptional regulator
Transcriptional regulator TetR family {ECO:0000313|EMBL:ADL35662.1}; TaxID=515622 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316); (Clostridium proteoclasticum).;"
Displaying 21 items

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