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L1_008_064G1_scaffold_5016_2

Organism: L1_008_064G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 17
Location: comp(559..1020)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9F3_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 139.0
  • Bit_score: 275
  • Evalue 3.10e-71
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EWC94607.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 139.0
  • Bit_score: 285
  • Evalue 4.20e-74
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 139.0
  • Bit_score: 275
  • Evalue 8.80e-72

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Taxonomy

Atopobium sp. ICM42b → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 462
CGCATGTTTTTCAGACATCGTTTGAGCAGATGGGGCTGTGAGATGGCTAAGGCAGGTGTTACCAAAAAGACCGACCCAGGTTTGGGTAGGACAGTAGCAAGGTTGTTACAAGAAAGTGGCAAGCGCCAGGTAGACCTGTGCGAATTCTCACATTGGTCACGTGCGTATGTCTCTTATATTTGCACCGAGCGCCGTAAGTGGCCTTCATTTGATAAAGCAAAGGTTATCGCTGACTTTTTCTCCTTAAGTCTTGATCAACTCTGGGTTGAGCATCTTAAAGATCTTGTTGATGCTGGCGTGGAGCTTACAGAGATGCAGAAGAAGAATTTAGCCGAGGGTGTTAATCTTCCAAATCCTACCGTTCTGCATGACGGAAATGACAATAGAGAATACCTTCAACCTGTTGTTTCCTCGGGGAACGGTTCAGATTACACGCTCCCGGAAATTCTTGGCGTCGAATAA
PROTEIN sequence
Length: 154
RMFFRHRLSRWGCEMAKAGVTKKTDPGLGRTVARLLQESGKRQVDLCEFSHWSRAYVSYICTERRKWPSFDKAKVIADFFSLSLDQLWVEHLKDLVDAGVELTEMQKKNLAEGVNLPNPTVLHDGNDNREYLQPVVSSGNGSDYTLPEILGVE*