ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

L1_008_064G1_scaffold_25_9

Organism: L1_008_064G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 17
Location: comp(9583..10059)

Top 3 Functional Annotations

Value Algorithm Source
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 158.0
  • Bit_score: 317
  • Evalue 8.00e-84
ispF; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:2.7.7.60) similarity KEGG
DB: KEGG
  • Identity: 98.7
  • Coverage: 158.0
  • Bit_score: 313
  • Evalue 1.80e-83
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=2 Tax=Bifidobacterium dentium RepID=E0Q783_9BIFI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 158.0
  • Bit_score: 317
  • Evalue 5.70e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium dentium → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGCGCATCGGTCAAGGTTTCGACGCCCATCGATTCGCTGATTCCAATGCAGGCAGGCCGTTATGGCTTGCCTGTTTGCATTGGGAGGGTGATGGCATAGCAGGTGATTCCGATGGTGACGTCGTCGCACATGCGTTGATCGACGCATTGCTGGCAGCCGCGCACCTTGGTGATATCGGAACGTTGTTCGGCGTGGGCGCAAATTCCGACGGTGCCGGCAAACATGGTGCCGAAATGCTGCGTACCGCTGTCGGCTATCTGAAGGACCATGGCATGCGGCCGATAAGTGCCAGCGTGGTAATCATCGCCAATCGCCCGAAGATCGGCACGCGTCGCATGGAGGCGGAAGCGGCGTTGTCTGCAGCGATCGGTTGCGAGGTGTCGGTGACGGCCACCACTACGGATGGCATGGGATTCACCGGTTCGGGGGAGGGCGTAGCCGCCATCGCCAACGCCCTTGTGGAACCGGTGGAGTAG
PROTEIN sequence
Length: 159
MRIGQGFDAHRFADSNAGRPLWLACLHWEGDGIAGDSDGDVVAHALIDALLAAAHLGDIGTLFGVGANSDGAGKHGAEMLRTAVGYLKDHGMRPISASVVIIANRPKIGTRRMEAEAALSAAIGCEVSVTATTTDGMGFTGSGEGVAAIANALVEPVE*