ggKbase home page

L1_008_092G1_scaffold_444_5

Organism: L1_008_092G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(3350..5008)

Top 3 Functional Annotations

Value Algorithm Source
DEAD/DEAH box helicase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SIT5_CLOSY similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 552.0
  • Bit_score: 1080
  • Evalue 0.0
Putative DEAD-box ATP-dependent RNA helicase CshA {ECO:0000313|EMBL:ERI78554.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 552.0
  • Bit_score: 1079
  • Evalue 0.0
Superfamily II DNA and RNA helicases similarity KEGG
DB: KEGG
  • Identity: 82.0
  • Coverage: 557.0
  • Bit_score: 921
  • Evalue 6.50e-266

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] symbiosum → Lachnoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1659
ATGGAAGCAATTAAGTTCGAAGATTTAAATTTAGATGCGAAGATTTTACGCGCAGTTACAGATATGGGTTTTGAAGCGGCATCACCGATTCAGGGCCAGTCGATCCCACTGGAGCTTGAAGGTCTGGATATCATCGGCCAGGCACAGACAGGAACAGGCAAGACGGCGGCATTTGGTATCCCCCTTCTTCAGAAGGTAGATCCGAAGAGTAAAAAGTTACAGGCGATTATCCTGTGCCCTACAAGAGAACTGGCAATCCAGGTATCCGAGGAAATCAGGCGCCTTGCAAAATATATGCACGGAGTTAAGGTTCTTCCGATTTACGGAGGACAGGAAATCGGAAGACAGATACGTTCCCTCAAGGACGGGATTCAGGTTATCATCGGAACGCCGGGACGTGTTATGGATCATATGCGCAGGAAGACGCTGAAGCTGGAGCATGTACACACAGTAGTTCTCGACGAGGCGGATGAGATGCTTAACATGGGATTCCTGGAAGATATGGAAACCATTTTGAGCGAACTTCCGGAAGAACGCCAGACTGTGATGTTCTCCGCCACAATGCCTCCCGCTATCGCAGAGATTGCGAAGAAATTCCAGAAGGATCCGGAGATTGTAAAGGTAGTGAAAAAGGAACTGACGGTTCCGAAGGTGACACAGTATTATTATGAAGTAAAGCCAAAGACAAAAGTAGAGGTTATGTGCCGTCTGCTGGATATGTATGATCCGAAGCTCTCCATCGTTTTCTGCAATACAAAAAGACAGGTGGATGATCTGGTGCAGGAGCTTCAGGGCAGAGGCTATTTTGCCGAAGGACTTCACGGTGATCTGAAGCAGATGCAGAGGGACCGTGTCATGAACAGCTTCAGAAACGGCAGAACCGATATTCTGATAGCGACGGATGTGGCTGCCAGAGGTATCGACGTAGACGACGTAGAAGCCGTATTTAATTATGACATTCCTCAGGACGACGAGTACTATGTCCACAGAATCGGACGTACCGGCCGTGCAGGCAGGGAAGGTAAGGCCTTCAGCCTGGTAGTTGGCAGAGAAGTATATAAGCTGAGAGAAATCCAGCGTTACTGCAAGACTAAAATCATTCCGCAGCCGATTCCGTCCCTGAATGACGTGACATCGATTAAGGTGGAGAAGATCATGGACAGCGTGGAAGAGATTATCCGCGATAGTGATCTGGATAAAATTATAAACATCGTTGAGAAGAGAGTGCTGGAGGAAGACTATACAACACTTGATCTGGCAGCGGCCCTCCTCAAGATGTCCATGGGTGACGACTACGAAGATATTTCGGTTGAGAGAACGCCTCTGCGTTCCCTGGATGAACTGGAGGATTACGAGCGGGGCGCAAGGAGCAGAAACAACGGACGCGGAGCCAGATCAGGCAGCCGCGGCGGCAGCGAGAATGTTGCCCGTCTGTTCATTAATATCGGTAAGAACCAGGGAATCAAACCGGGAGATATTCTGGGTGCGATTGCCGGTGAATCCGGAATGCCGGGCAGAATGGTCGGAAGCATTGACATGTTCGATAAATATACCTTTGTGGAAGTGCCGAGAGAGCAGGCCGACGTCGTATTACAGGCGATGAAGGATGTCAAAATTAAAGGCAAGAATGTCCACATGGAAAAAGCCAACAGGAATTAA
PROTEIN sequence
Length: 553
MEAIKFEDLNLDAKILRAVTDMGFEAASPIQGQSIPLELEGLDIIGQAQTGTGKTAAFGIPLLQKVDPKSKKLQAIILCPTRELAIQVSEEIRRLAKYMHGVKVLPIYGGQEIGRQIRSLKDGIQVIIGTPGRVMDHMRRKTLKLEHVHTVVLDEADEMLNMGFLEDMETILSELPEERQTVMFSATMPPAIAEIAKKFQKDPEIVKVVKKELTVPKVTQYYYEVKPKTKVEVMCRLLDMYDPKLSIVFCNTKRQVDDLVQELQGRGYFAEGLHGDLKQMQRDRVMNSFRNGRTDILIATDVAARGIDVDDVEAVFNYDIPQDDEYYVHRIGRTGRAGREGKAFSLVVGREVYKLREIQRYCKTKIIPQPIPSLNDVTSIKVEKIMDSVEEIIRDSDLDKIINIVEKRVLEEDYTTLDLAAALLKMSMGDDYEDISVERTPLRSLDELEDYERGARSRNNGRGARSGSRGGSENVARLFINIGKNQGIKPGDILGAIAGESGMPGRMVGSIDMFDKYTFVEVPREQADVVLQAMKDVKIKGKNVHMEKANRN*