ggKbase home page

L1_008_124G1_scaffold_6_14

Organism: L1_008_124G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 16
Location: comp(16857..18767)

Top 3 Functional Annotations

Value Algorithm Source
Putative type IV secretory pathway VirD4 component n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8KYV9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 91.7
  • Coverage: 636.0
  • Bit_score: 1182
  • Evalue 0.0
Putative type IV secretory pathway VirD4 component {ECO:0000313|EMBL:CEH59122.1}; TaxID=434928 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv. citri.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.7
  • Coverage: 637.0
  • Bit_score: 1222
  • Evalue 0.0
traD; type IV secretory protein conjugation protein TraD similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 622.0
  • Bit_score: 651
  • Evalue 1.40e-184

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Xanthomonas citri → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1911
GTGAGCAAATCCACGGTCTATGACTGCTGGAGCTGGACGGTCCCGCCGAGCATCGAGCCGAGCCGCGAAGTCCGTTACTGGCCCCAGGGGTTGCTTAGCGGGGCATGCATCGCGGCGCTGACCTATCCGGTCGCGCTCTGGCTGGGTTGGCAGGTGCCCAGCAGTCACACCCTCATGAACTACAGCCAGGCACTGACTGGCAGCCTGGCAGCGATGGGGAACCTTGCCACCGGCACCATCTCCTTCCGAGAGCCTGCCGCGGCGTTCTGGGAGGTGGCCAAGGAGCAGGCCACGTTTGGCACATTGGCACGGGTCGGCGTTGCGGCGGGCTTGGCCGGGTGGGCGTCGGCTTGGGTAACGCGTCGGGGGCTCATCCCGCGCTCAAATACTTGGCATGTGTCCGGCGCTCAACTGCTACAGGGGAAAGAGGCCCTGACTGAAGCCCGGCGTCGTTCGCTCACGAAGAAAGAGCAGGAAGACGAGCTGCATGCCTTGTCGCTGCATCCCGACTGGATCGCAAGCAAGAAGCTGCTGGCCCGGCACATGTTCATCTACGGCAGCGTGGGCAGCGGTAAGAGCGTCATCCTCAAGCACCTGCTGGAGCAAACGGTCCGTCTCAAAAAGAAAAGTTTCATCTACGACATCAAAGGGGACTTTACGTCCATTTTTAAGCACCCGGTCATCGTCTGCCCCTTCGACAAACGCAGTTGGATCTGGGACGTGGGCCGTGACGTGGCGACGCAAACCCAAGCCGCCGCATTCTCCCAAAGCATCATCCCCCCGGAGGAGGGCAGCGGCGCATTCTGGGCGTCTGCGGCGCAAGCCTTGCTGGAAGGGTGCGTGCGCGAACTCCAGGCCACGAAGGGCAAGAGCTGGGGGTGGGCAGAGTTGGCCGCGTTGGTTGCCCGTCCCGCTGAACCGATGGCTAGAGCGCTTTCAATCCACTATCCCCGCGCCGCCGCGCTCATTGCCAACCCCGACAGCAACACCACCAGCAGCTGTATGGCCGTGCTTGCCAACGGCACCGCGGTCATTGAGCGCCTGGCCTTGGCGTGGCCGGAGCGTAAGTCAGACCGCATGTTCTCCATGTTGGATTGGATCAAGGACGATTACACGGGGCGAAAACAGGTCATTGTGCAATCGGGTCCGGATGAGGTGCTGGCGCGCAGTTACATCAGCGCGATGATCAACTGCGCGGTGCCCGAGATCATTTCGCCAAGCCTGCCGGATGACGAGGCCGGGCGACTCCTGGGGTTCTTCTTCGATGAGCTCACCTCCGCCGGCAAGCTCAACATCGAGCCGTTGCTGGCCCTGGGCCGGTCGAAAGGCGTAGTGGCTTGTATGGCCGTCCAAGACTGGTCACAGGTCGAGAAGGTCTACGGAGACAAGACCGCGCAGGCGTTTTCTGGGTTGGTTGGCACACACATCATTTGCCAGCTTCAGGTCGGCGAGACCCGAGAGAAGATCTCCCGGAACCTGGGCAAGCGGACGGTGGCTTGGCGCACGCACGACGACAAGGCGACTGTCCACGAGGAGTCGAAATCCGTTGTTCCGCCAGGGCGCCTCACCGACGATCTAGGCTTCCGCAAAGGGAAGGCCTACGGCCCCGAGCGCTGGGGCATCCGAGCCATCGTCCAGACCACCGGGGATCCGCTTCTGCTGGACTGGCCAGGCGTGAGCTATCCCAAGGTTCGAGATGGGCAGGAACGGGCGAGTTGGACAGAGGAGGGCGCTCGCCCGGTGGAGCAGAAACCCATGCCGCAGAGCGACGCGCAAAGCGCCGCAGAGGTCCAGCGCGTGCTCAAGATGACCGCAGACCAAGCCGCCGCAGAGCTGGAGAAGCGGGGTGCCACTCCGCCGAAACTTCGCGCCGTTTCTGACGACGAGCTGGAAGCCATCTTCCGCAAGTAG
PROTEIN sequence
Length: 637
VSKSTVYDCWSWTVPPSIEPSREVRYWPQGLLSGACIAALTYPVALWLGWQVPSSHTLMNYSQALTGSLAAMGNLATGTISFREPAAAFWEVAKEQATFGTLARVGVAAGLAGWASAWVTRRGLIPRSNTWHVSGAQLLQGKEALTEARRRSLTKKEQEDELHALSLHPDWIASKKLLARHMFIYGSVGSGKSVILKHLLEQTVRLKKKSFIYDIKGDFTSIFKHPVIVCPFDKRSWIWDVGRDVATQTQAAAFSQSIIPPEEGSGAFWASAAQALLEGCVRELQATKGKSWGWAELAALVARPAEPMARALSIHYPRAAALIANPDSNTTSSCMAVLANGTAVIERLALAWPERKSDRMFSMLDWIKDDYTGRKQVIVQSGPDEVLARSYISAMINCAVPEIISPSLPDDEAGRLLGFFFDELTSAGKLNIEPLLALGRSKGVVACMAVQDWSQVEKVYGDKTAQAFSGLVGTHIICQLQVGETREKISRNLGKRTVAWRTHDDKATVHEESKSVVPPGRLTDDLGFRKGKAYGPERWGIRAIVQTTGDPLLLDWPGVSYPKVRDGQERASWTEEGARPVEQKPMPQSDAQSAAEVQRVLKMTADQAAAELEKRGATPPKLRAVSDDELEAIFRK*