ggKbase home page

L1_008_241G1_scaffold_123_1

Organism: L1_008_241G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 16
Location: 315..2750

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UHY8_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 811.0
  • Bit_score: 1628
  • Evalue 0.0
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCZ68412.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 811.0
  • Bit_score: 1628
  • Evalue 0.0
domain of unknown function DUF1738 similarity KEGG
DB: KEGG
  • Identity: 33.7
  • Coverage: 380.0
  • Bit_score: 191
  • Evalue 8.90e-46

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcus gnavus CAG:126 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2436
ATGACAAAGTTACAACAGCAATTAGCAGAACAATTTTTACACATCTTGGAAGAGGAAAAACTGGACTGGAAAAAAGAATGGAGCGGACTTTCAGGAAGACCTTATAATCCGGTTTCCAAGACGGTTTACCATGGGAGCAATTACTTTTCTTTGCTGCTGACATCCATGGCGAAAGGATATCAGGATCCCAGATGGTGTACGTTTGCACAGATCAAAGAGCAGGGATGGACACTAAAAGCAGGAAAGGGACAGAGTGCCAAAATAGAATTCTGGTATCCCTATGATCGGGAGCAGAAAAAGGCAATCAGCTGGCAAGAATTTCGGGAAGCTGGTGGACAGATCAATGATCGGTATCAGCTTTTTAGCCGAGCGTATTCTGTTTACAATGGGGATATGATTGTAGGAATCCCCAAGTTGGAGGTAACACAGAATGAAATACAGCCAGTGGAATTGGTCGATACCATATCCCGGAATATGGGAGTTCCGATTTCTTATCATCAGACAGCCCGGGCATTTTACCGACCAATAGAAGATCGAATCTATCTCCCGTATCGCCAGCAATTTAATTCCGAGTATGCTTATGCCTCTACAGCACTCCATGAACTGTCTCATGCGACAGGGGCAGAACATCGTCTGAACCGGAAACAGGGTGGAGAATTTGGAACAGAGCCCTATGCTTATGAAGAACTGGTGGCGGAGATCAGCTCCTGTTTCCTGTCCAGTGAGCTTCCGATCGGACAGACAGAAGAGCACTTAAAGAACCACAAGGCGTATGTTCAGAGCTGGATCCAGGGAATTAAAGAGCAGCCAGAGGCTTTATTCCGTGCCGTGAAAGATGCGGAACAAGCCGCCGCTTATCTGGAATATCACGGTGGATTGATCACATTGGAAGAATATCAGACCTATGGAATCGAAATAGAACTGGCAGCTCAAACACGTGATCCTGTTCCGAAATTCGGAACGGAAGAGACAAAGAAGGTTGCGATCGAAAGCACCATGGATTATGAGGACTTGGATTTCCATGTAAACCGATATAACGAAAAGGGATATGGAAGGGAAGAGTATTATCGGATTGTTTCTTTGGATGAAAAGGGACTTGTTGCGCCAGTAGATCGAACGGTGTATCGGAATATGGAACAAGTGAGAACTGTGATTTCCCAAAAAACAGGATGGAAAGAAGTTCCGTATGAAGACCTGACTCAGGAAGCAATGAAGAATCGGATGGAACAGGCAGTTTTCCCGAATCTCAAACAATCGGATGGGTGGAGGCTTGCAAAAGAAGGAGAACATTATATGGTGTATCTGGATGGAGAGCAATTTCTGGCAGGAACATCAGAGAAGGTTCAGGAATTGAACCGGAGAGCCGGGGAAGGGAAACATCCTATGCTACAGCGTGCGTTTACAGCACTGCGGGCACAACAGGGAATGAGCTTGGAGGAAGCGGCTGAAAAAATGTACCTGTCTGTCCCAGAAGTGAAAGCAGTGGAAAAAGGAGTGCTGCAACTGCAGCCGGAATCCTTGCAGCTTTTTTGCAATGCCTGTGGAGTTTCCGTAGATGCATTGCGGGAAGGAAAGGTTATAAAACAGGCATCAGCAGATCAGTTAAAAGAAGGAATCGATAAAATGACCCGTCAGATCAATCAGCTGGAGAACAATCAGACATATCTGCAGGGAGTTGTAGAACGATATGGACTGGAAGTCTCTCCGGAATTGGAGGAAGCGAAAAGGAAGATCGCAGCGTATGAAAAGAGCATTGGACGGACAGAGAGCATGATAAACCAAGCATCCACGGAACAGATCTTAGCGTATGGGAAGAAGTGCGAGTCATATCTCAACTTTGGGAACAGTGTGGATCGGGTACTTCATCCATTGGAAAGAGCGTCTCCAAGACGAGAAGCTGTTTTAGTTTGTACGACACCGGAAATTTTAAGAGAAGTTGGTCTGAAAGATTTGCCCATGCATATCACGCAGAAGCATATCGTAGATTGTTTGCATGAAAAGACTTACAACAATGATCATTATCACGGATTATCTGTTCAAGAGTTAAAACGGCTTCCAGAAGCACTGGAATCACCCGTTATCTTAGCAGAATCTCTTACAAAGGAGGATTCTCTGGTAGCTGTGCTGGATTATCGAGAACAAGATGGAAATCCAGTAATTGTGGCGGTTCGTTTGAATGGGAATGCTATATATGAATTACGAAGAGTAGACTCCAATTTTATCACAAGTGCTTATGGAAAAGACAATTTCTCAGAATTCTATCAGAGGATTCTGGATCAAGGAAAATTGCTTTATGCGAATAGGGAAAAGGGGGAAAAGCTGGGATATTATCTGGAAAATCAGAAATCTCAGATACCAGAATATGATAAAATTTTAAAGAAGATGGCATTACCGGAATCGGAACAAATCAAGCCGAAACATATTCGAAGGTTCTAG
PROTEIN sequence
Length: 812
MTKLQQQLAEQFLHILEEEKLDWKKEWSGLSGRPYNPVSKTVYHGSNYFSLLLTSMAKGYQDPRWCTFAQIKEQGWTLKAGKGQSAKIEFWYPYDREQKKAISWQEFREAGGQINDRYQLFSRAYSVYNGDMIVGIPKLEVTQNEIQPVELVDTISRNMGVPISYHQTARAFYRPIEDRIYLPYRQQFNSEYAYASTALHELSHATGAEHRLNRKQGGEFGTEPYAYEELVAEISSCFLSSELPIGQTEEHLKNHKAYVQSWIQGIKEQPEALFRAVKDAEQAAAYLEYHGGLITLEEYQTYGIEIELAAQTRDPVPKFGTEETKKVAIESTMDYEDLDFHVNRYNEKGYGREEYYRIVSLDEKGLVAPVDRTVYRNMEQVRTVISQKTGWKEVPYEDLTQEAMKNRMEQAVFPNLKQSDGWRLAKEGEHYMVYLDGEQFLAGTSEKVQELNRRAGEGKHPMLQRAFTALRAQQGMSLEEAAEKMYLSVPEVKAVEKGVLQLQPESLQLFCNACGVSVDALREGKVIKQASADQLKEGIDKMTRQINQLENNQTYLQGVVERYGLEVSPELEEAKRKIAAYEKSIGRTESMINQASTEQILAYGKKCESYLNFGNSVDRVLHPLERASPRREAVLVCTTPEILREVGLKDLPMHITQKHIVDCLHEKTYNNDHYHGLSVQELKRLPEALESPVILAESLTKEDSLVAVLDYREQDGNPVIVAVRLNGNAIYELRRVDSNFITSAYGKDNFSEFYQRILDQGKLLYANREKGEKLGYYLENQKSQIPEYDKILKKMALPESEQIKPKHIRRF*