ggKbase home page

L1_008_241G1_scaffold_5226_1

Organism: L1_008_241G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 16
Location: 2..676

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 224.0
  • Bit_score: 454
  • Evalue 7.70e-125
Ribonuclease R n=2 Tax=Erysipelotrichaceae RepID=H1B1G0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 224.0
  • Bit_score: 454
  • Evalue 5.50e-125
ribonulease R similarity KEGG
DB: KEGG
  • Identity: 49.8
  • Coverage: 225.0
  • Bit_score: 230
  • Evalue 2.80e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. HGF2 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 675
TTTCAGGGCGGTATACAAAATGTTTACCCCGCACAGCTGCAGAGTCTGCTGAATGAGGCCAGAGGACAGGAGAATTATTTTGTGTTATCGAGCTTTATGCTGCGGGCTATGCAGAAGGCACGCTATGATAACCGCTGTATCGGGCATTTCGGTCTGGCATTGAAAAATTATCTGCATTTTACTTCGCCGATTCGGCGTTATCCGGATCTGGTAGTTCACCGAATGCTTCGGCGTTATATCTTTACATCCAGTGATGATGTCGAGCGCATGAAGCAGGATGAGCTGTGGTGTGAGGCTGCCGCTAATCAGGCAAGTGAGCGGGAACGCAATGCAGTGGATGCGGAGCGGGAAGTAGACGATATGAAAAAGGCGCAGTATATGGAGCGCTTTGTCGGGCATATGTTTGACGGTGTTGTCAGCGGTATCACCAAATTCGGTATGTTTGTCGAGCTGGAAAACACGGTTGAGGGTCTTGTGCATGTGACATCCCTAACGGATGATTATTATCATTATGATGAAATGACGAAATCTCTGATTGGTGAGCATACGGCTAAGGTGTATAAAATGGGACAAAAGGTACGTGTGAAATGCAGTGGAGCGGATCGTTTCAAACGGGAGGTCGACTTCGAGGTCACAGAGAAGAAAAAGCGACAGCGCAGGAAGGCATCCCGATAG
PROTEIN sequence
Length: 225
FQGGIQNVYPAQLQSLLNEARGQENYFVLSSFMLRAMQKARYDNRCIGHFGLALKNYLHFTSPIRRYPDLVVHRMLRRYIFTSSDDVERMKQDELWCEAAANQASERERNAVDAEREVDDMKKAQYMERFVGHMFDGVVSGITKFGMFVELENTVEGLVHVTSLTDDYYHYDEMTKSLIGEHTAKVYKMGQKVRVKCSGADRFKREVDFEVTEKKKRQRRKASR*