ggKbase home page

L1_008_364G1_scaffold_10264_2

Organism: L1_008_364G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 16
Location: comp(934..1290)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 118.0
  • Bit_score: 238
  • Evalue 4.60e-60
Peptide deformylase n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BMC1_VEIPT similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 118.0
  • Bit_score: 238
  • Evalue 3.30e-60
peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 118.0
  • Bit_score: 238
  • Evalue 9.20e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Veillonella parvula → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 357
GTTGGTCTTGCAGCACCTCAAGTGGCTGTAGCTAAACGTATTATCGTTGTAGATGACCAATCTGGTAGTGGTCTTATTGCGCTAATTAACCCTGAAATCACTCATGCTGAAGGTTCTCAAGTTGGACCTGAAGGATGCTTAAGTGTGCCAGGATATTTCGGAGATGTGGAACGATTTAATAAAGTCACTGTTAAAGGTATTGATCCACATAATAAGAAGGTAACTATAAAAGCTGAAGGTTTTTTGGCGCGTATTTTCCAACATGAAATTGATCACTTGGAAGGTCATTTGTTTATTGAAAAAGCAACTAACTTACGATTAATTACTGATCATCCAGAGGAGAAAGAAATTGTCTGA
PROTEIN sequence
Length: 119
VGLAAPQVAVAKRIIVVDDQSGSGLIALINPEITHAEGSQVGPEGCLSVPGYFGDVERFNKVTVKGIDPHNKKVTIKAEGFLARIFQHEIDHLEGHLFIEKATNLRLITDHPEEKEIV*