ggKbase home page

L2_013_000G1_scaffold_37055_1

Organism: L2_013_000G1_public_UNK

megabin RP 54 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 21 / 38 MC: 18
Location: comp(1..750)

Top 3 Functional Annotations

Value Algorithm Source
Type 1 fimbriae anchoring protein FimD n=1 Tax=Escherichia coli SCD1 RepID=U9VV96_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 248.0
  • Bit_score: 505
  • Evalue 1.80e-140
outer membrane usher protein similarity KEGG
DB: KEGG
  • Identity: 99.2
  • Coverage: 248.0
  • Bit_score: 505
  • Evalue 5.00e-141
Type VII secretion system (T7SS), usher family protein {ECO:0000313|EMBL:KEO13847.1}; TaxID=1444179 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-177-06_S3_C3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 248.0
  • Bit_score: 505
  • Evalue 2.50e-140

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGGAAGAATCGGCGTCAGATGACAACATGCTGCCAGACAGCCTGAAAGGGTTTGCGCCTGTGGTGCGTGGTATCGCCAAAAGCAATGCCCAGATAACGATTAAGCAAAATGGTTACACCATTTACCAAACTTATGTATCGCCTGGTGCTTTTGAAATTAGTGATCTCTATTCCACGTCGTCGAGCGGTGATTTGTTAGTTGAAATCAAAGAAGCGGACGGCAGCGTCAATAGCTACAGCGTACCGTTTTCCAGCGTGCCATTACTCCAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCAGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACATGGTATGGTGGTGGACAATATGCTGAATATTACCGTGCCGCCATGTTTGGTCTGGGATTTAACCTTGGCGATTTCGGAGCAATTTCGTTCGATGCGACCCAGGCGAAGAGTACGCTGGCAGACCAAAGCGAACATAAAGGTCAGTCATATCGTTTTCTGTATGCCAAAACGCTCAACCAATTGGGCACTAATTTTCAATTGATGGGCTATCGCTATTCGACGTCGGGTTTCTACACCCTTTCCGACACCATGTATAAACATATGGATGGCTACGAATTTAATGACGGTGATGATGAAGATACGCCGATGTGGTCGCGTTATTACAATTTGTTTTACACCAAACGTGGCAAACTGCAGGTC
PROTEIN sequence
Length: 250
MEESASDDNMLPDSLKGFAPVVRGIAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFSSVPLLQRQGRIKYAVTLAKYRTNSNEQQESKFAQATLQWGGPWGTTWYGGGQYAEYYRAAMFGLGFNLGDFGAISFDATQAKSTLADQSEHKGQSYRFLYAKTLNQLGTNFQLMGYRYSTSGFYTLSDTMYKHMDGYEFNDGDDEDTPMWSRYYNLFYTKRGKLQV