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L2_013_000G1_scaffold_5731_1

Organism: dasL2_013_000G1_concoct_60_sub_fa

near complete RP 44 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 8 / 38
Location: comp(1..3429)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1125723 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. oral taxon 279 str. F0450.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 809.0
  • Bit_score: 1578
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J5TMU1_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 809.0
  • Bit_score: 1578
  • Evalue 0.0
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 798.0
  • Bit_score: 937
  • Evalue 1.80e-270

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Taxonomy

Porphyromonas sp. oral taxon 279 → Porphyromonas → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3429
ATGACGGGGCTTTCTGAGCAAGGAGTCTCCCTCTCCCAGCCCCTTCCGCCTCACACCCGTCGCTCCCTCTCGGGGCTTATGGGTTCTGCCCGTGCCTTCGTCGCTCCGCGCATCCGCCAGGCGGCACCGCTCGTGGCACTCCTACGTGACGAAGAGGAGGCCGGCTACTTCTATTCGGACTTAGCCCAGCTCTTAGGCGAGGATGGCGTGCTCTTCTTCCCCTCAGCCTATCGCCGTGCGATCCGCTATGGGCACCGCGATGAGTCGAGCGCCCTCCTGCGCTCCATGGTGCTCAGCGCCCTGATAAGTGCGGCAGCACCAGGCGGCACTCCCCTACCCATCCTCGTCACCTATCCCGAGGCCCTCATGGAGGGCATCCCCCAAGAGAGTGGCACGAAGGAAGAGCCTCTCATCATCCATCGGGGGGACGTCATCGAGCGTGACCACCTGCGTGACCAGCTCCTCGCTTGGGGCTTCGAGCGCGTGGACTACGTCTATGAGCCGGGGCAGTTCGCCCTGCGTGGGAGCATTGTAGACATCTATTCCTTTGCCTCCGAGCTCCCCTACCGTCTGGACTTCTTCGATGACGAAGTCGAGAGCGTACGCTGCTTCGAGGTCGACAGCCAGCTCTCCGTACGTCAGCTCACAGAGATCACGCTGAGTCCCGACCTCTCTCAGGGCTCGGGCGACCTCACCTCGCTCATCAGCCTGCTCCCTGCAGGCAGCCAACTCCTCCTCTCGGGTGGCGGCTCGCTGAGTACCCGCCTCGAGATGACTTGGACCGAAGCCCCACTGCTGCAAGACGGCGAAGGCTTCGAAGACCTGGAGGCGCTGCGTCGTATGCTCATCGAGCCCAGCCAGCTCTTCGCCGAGATCCAGGCACTCTCGGGCTACGAGCTGACGGACGAGGCTACACCGAAAGGCCTGCACTTCCACACCACACGACAGCCCCTCTTCCACAAGGACTATGATGGTCTGGCCGCCCTGATCCGCTCTTGGCGCGCCGACGGCTATACCATATATATATGTGCAGCGAGCCGTGAGGGTCACGAGCGTGCCCGCGACATCCTCACCCCACGCCTCAGCGAAGCCGAGCTACCTACAGAGGTGACCCTCGGCCTGCACGAGGGCTTCGTCGACGAAGACCACCGCTGGGTACTGCTCACCGAGCACGAGCTCTTCGACCGCTACCACAAGTACACCCTGCGCAGCGACAAGGCCAGCTCCGGGAAGGTCACACTCTCGCTGAAGGAGATCCAGAGCTTCAGCCGTGGCGACCTCATCGTCCACGCCGACCACGGTATCGGGCGCTTCGACGGCCTGGTGAGTATGCCCCAGGGCGACCACATGCAGGAGTTCGTCAAGCTCGTCTACCGCAACAATGACACCATTTATGTCAACCTGCACAGCCTGCACAAGCTCTCCCACTACCGCTCGGGCGAAGGGGGGAAAGAAGTCACGCTCAGCGCCGTCGGCTCGGGGGCATGGCAGCGTATCAAGGAGCGCACGAAGAAGCGCATCAAGGATATCGCCCGTGATCTGATACGTCTCTACGCCAAGCGCCGTGAGACGGAGGGCTTTGCCTTCAGCCCCGACACCTACCTCCAGCACGAGCTCGAGGCATCGTTCGCCTTCGAGGACACCCCCGACCAAGCCGCTGCCGTCACCGCTGTGAAGGCCGATATGGAGCGCCCCTACCCGATGGACCGCCTCCTCTGTGGGGATGTCGGCTTCGGAAAGACGGAGGTAGCCGTGCGTGCCGCCTTCAAGGCTGCCACCGACGGCAAGCAGGTCGCCGTCCTCGTCCCCACGACGGTCTTAGCGTACCAGCACTACCGCACCTTCTCCAAGCGACTGAAGGACTTCCCCGTCCGTGTCGACTACATCTCCCGTGCCCGCACGCCGAAGGAGCTTCGTGCCATCCTCGCAGATCTCCGTGAGGGGAAGATCGACATCATCATCGGCACGCACCGCCTGACGAGCAAGGACGTGGCGTTCCTCGATCTTGGCCTCCTGATCATCGACGAAGAGCAGAAGTTCGGCGTCGCCACGAAGGAGAAGCTCCGTCAGCTTCAGGTCAATGTCGACACGCTCACGATGAGTGCCACGCCTATCCCCCGTACCCTACAGTTCTCACTGATGGGTGCGCGTGACCTCTCGAACCTCAATACCCCACCTGCCAACCGCCGTCCCGTAGAGACGCTCCTCACGCAGACCACCCCGCAGATCATCCGCGAGGCCGTGGGCTTCGAGATGAGTCGCAACGGGCAGGTGTACTTCGTCAATAGCCGCATCAGCAACATTGAGAACCTCGCTGCCCTCATCCAGCGCGAAGTCCCCGACGCACGCATCGCCGTCGCCCACGGGCAGCTGGCACCGAAGGAGATGGAGCAGATCCTCATCGACTTCGGCAACCACGAGTACGAGTACCGGGCGGACGGACTGGCGAAGATGCTGCGTGCCGCCGCTGAGAGCGGCGACCCGCTGCCCGCACTGGTCCAGGCCAACTATGTGACGCCCAAGGACCCGGAGGCGGACGCGGAAGTGGTGGAAGCCATGGACGACTGCGGCGTCACCGATTACGTGATGATTGAGCGGGACGGCGTGCGTTTTGCGGTGTTCGGCGTGATGGGCGAGGACGCGGACGCCTGCGCGCCCATGTCCGGTATGGAGTTTGAGCCGGTGATTGAGGCGGCCCAGCGGGTGGTGGATGAGATTAAAGCCAATGAGGAGTACGACTTTCTCGTCTGCCTGTCCCACAGCGGCACCAATCCGGACCCCAAGAAGTCGGAGGATGAGCTGTTGGCCAAAAATGTGGACGGCATCGACTTTATTGTCTCCGGCCACACCCACTCCACCATGCTGGAGCCCAAAATCGTGAACAACACCGTCATCGGCTGCACGGGGGAGTACTGCACCAACCTGGGCAAGGTGACCATCAAGAAGGACGCGGAGGGCAACAACGCGGTCCTGGACTACGAGTTAATTCCCATTGACGAGAACGTGGCTGATAATCCGCAGATTGCCGCCCAGGTGGCCGATTACAAGGAACTGGTGGAGACGGAATATCTGTCCCAGTTTGACATGACCTTTGACCAGGTGCTGGCGTACAGTCCCTTCGATTTCACGCCCATCTCCCAGTTCGCTCAGGAGCAGGAGGAGGACAGCCTGGGCAACCTGATCACGGACGCCTATATCTACGCCGTCCGGCAGGTGGAGGCAGGCACCAATGCGGCCCCCATCACAGCGGCCTTTGTCAACTCGGGCGTCATCCGGGCCAGCTTCTCACAGGGGGATATCACAGTCTCCGACGCCTTCAACGTCAGCTCCATCGGCTCGGGTGCGGACGGATCGCCGGGCTATCCGCTGATTGATGTGTGGCTCACGGGTAAGGAGCTGAAAACCGTGCTGGAGCTGGACCCGTCGGTG
PROTEIN sequence
Length: 1143
MTGLSEQGVSLSQPLPPHTRRSLSGLMGSARAFVAPRIRQAAPLVALLRDEEEAGYFYSDLAQLLGEDGVLFFPSAYRRAIRYGHRDESSALLRSMVLSALISAAAPGGTPLPILVTYPEALMEGIPQESGTKEEPLIIHRGDVIERDHLRDQLLAWGFERVDYVYEPGQFALRGSIVDIYSFASELPYRLDFFDDEVESVRCFEVDSQLSVRQLTEITLSPDLSQGSGDLTSLISLLPAGSQLLLSGGGSLSTRLEMTWTEAPLLQDGEGFEDLEALRRMLIEPSQLFAEIQALSGYELTDEATPKGLHFHTTRQPLFHKDYDGLAALIRSWRADGYTIYICAASREGHERARDILTPRLSEAELPTEVTLGLHEGFVDEDHRWVLLTEHELFDRYHKYTLRSDKASSGKVTLSLKEIQSFSRGDLIVHADHGIGRFDGLVSMPQGDHMQEFVKLVYRNNDTIYVNLHSLHKLSHYRSGEGGKEVTLSAVGSGAWQRIKERTKKRIKDIARDLIRLYAKRRETEGFAFSPDTYLQHELEASFAFEDTPDQAAAVTAVKADMERPYPMDRLLCGDVGFGKTEVAVRAAFKAATDGKQVAVLVPTTVLAYQHYRTFSKRLKDFPVRVDYISRARTPKELRAILADLREGKIDIIIGTHRLTSKDVAFLDLGLLIIDEEQKFGVATKEKLRQLQVNVDTLTMSATPIPRTLQFSLMGARDLSNLNTPPANRRPVETLLTQTTPQIIREAVGFEMSRNGQVYFVNSRISNIENLAALIQREVPDARIAVAHGQLAPKEMEQILIDFGNHEYEYRADGLAKMLRAAAESGDPLPALVQANYVTPKDPEADAEVVEAMDDCGVTDYVMIERDGVRFAVFGVMGEDADACAPMSGMEFEPVIEAAQRVVDEIKANEEYDFLVCLSHSGTNPDPKKSEDELLAKNVDGIDFIVSGHTHSTMLEPKIVNNTVIGCTGEYCTNLGKVTIKKDAEGNNAVLDYELIPIDENVADNPQIAAQVADYKELVETEYLSQFDMTFDQVLAYSPFDFTPISQFAQEQEEDSLGNLITDAYIYAVRQVEAGTNAAPITAAFVNSGVIRASFSQGDITVSDAFNVSSIGSGADGSPGYPLIDVWLTGKELKTVLELDPSV