ggKbase home page

L2_013_000G1_scaffold_3205

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_3205_1
unknown

Not on your lists

92..646
DNA (555bp) protein (185aa)

This feature has no annotations

L2_013_000G1_scaffold_3205_2
unknown

Not on your lists

comp(799..921)
DNA (123bp) protein (41aa)

This feature has no annotations

L2_013_000G1_scaffold_3205_3
unknown

Not on your lists

comp(869..982)
DNA (114bp) protein (38aa)

This feature has no annotations

L2_013_000G1_scaffold_3205_4
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1253..2083
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KDR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS44599.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
hypothetical protein
L2_013_000G1_scaffold_3205_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2412..3602)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PW86_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22746.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Site-specific recombinase XerD
L2_013_000G1_scaffold_3205_6
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3668..3880)
DNA (213bp) protein (71aa)
Excisionase family DNA binding domain-containing protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KV23_9CLOT
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:CCY68939.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
Excisionase from transposon Tn916.
L2_013_000G1_scaffold_3205_7
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3888..5603)
DNA (1716bp) protein (572aa)
DNA/RNA helicase, superfamily II n=1 Tax=Lysinibacillus fusiformis ZB2 RepID=K9A589_9BACI
Type III restriction enzyme, res subunit {ECO:0000313|EMBL:CDX03334.1}; TaxID=49338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (Desulfitobacterium frappieri).;"
DNA/RNA helicase, superfamily II
L2_013_000G1_scaffold_3205_8
unknown

Not on your lists

5756..7300
DNA (1545bp) protein (515aa)

This feature has no annotations

L2_013_000G1_scaffold_3205_9
unknown

Not on your lists

comp(7377..8045)
DNA (669bp) protein (223aa)

This feature has no annotations

L2_013_000G1_scaffold_3205_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8117..8590)
DNA (474bp) protein (158aa)
UPI0003D5C738 related cluster n=1 Tax=unknown RepID=UPI0003D5C738
DNA repair protein RadC {ECO:0000313|EMBL:ETI91001.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
radC; DNA repair protein RadC
L2_013_000G1_scaffold_3205_11
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8577..9086)
DNA (510bp) protein (170aa)
Resolvase, N-terminal domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NXH6_9FIRM
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EDM98996.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
putative site-specific recombinase
L2_013_000G1_scaffold_3205_12
unknown

Not on your lists

comp(9323..10189)
DNA (867bp) protein (289aa)

This feature has no annotations

L2_013_000G1_scaffold_3205_13
unknown

Not on your lists

comp(10224..10886)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Lachnobacterium bovis RepID=UPI0003B55A9D
L2_013_000G1_scaffold_3205_14
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11934..12266
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R2A7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91356.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
transcriptional regulator
L2_013_000G1_scaffold_3205_15
unknown

Not on your lists

comp(12284..12472)
DNA (189bp) protein (63aa)

This feature has no annotations

L2_013_000G1_scaffold_3205_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12545..12880)
DNA (336bp) protein (112aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=E4MCU9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KDS13458.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
Protein of unknown function (DUF2958).
L2_013_000G1_scaffold_3205_17
unknown

Not on your lists

comp(13009..13362)
DNA (354bp) protein (118aa)

This feature has no annotations

L2_013_000G1_scaffold_3205_18
unknown

Not on your lists

comp(13367..13549)
DNA (183bp) protein (61aa)
excisionase family DNA binding domain-containing protein
L2_013_000G1_scaffold_3205_19
unknown

Not on your lists

comp(13599..14114)
DNA (516bp) protein (172aa)

This feature has no annotations

Displaying 19 items

View Taxonomy