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L2_013_037G1_scaffold_321

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_037G1_scaffold_321_1
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(1..225)
DNA (225bp) protein (75aa)
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:EWC94492.1}; EC=1.1.1.157 {ECO:0000313|EMBL:EWC94492.1};; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
3-hydroxyacyl-CoA dehydrogenase NAD-binding n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W922_ATOPD
3-hydroxybutyryl-CoA dehydrogenase
L2_013_037G1_scaffold_321_2
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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430..726
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W923_ATOPD
Uncharacterized protein {ECO:0000313|EMBL:EWC93735.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
hypothetical protein
L2_013_037G1_scaffold_321_3
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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790..2499
DNA (1710bp) protein (570aa)
Putative uncharacterized protein n=1 Tax=Eggerthella sp. (strain YY7918) RepID=F7UWI1_EEGSY
PF09848 family protein {ECO:0000313|EMBL:EWC93731.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
hypothetical protein
L2_013_037G1_scaffold_321_4
Eggerthella sp. CAG:209, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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2665..5244
DNA (2580bp) protein (860aa)
Uncharacterized protein n=1 Tax=Eggerthella sp. CAG:209 RepID=R6HGV8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDB33244.1}; TaxID=1262875 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:209.;"
hypothetical protein
L2_013_037G1_scaffold_321_5
Eggerthella sp. CAG:209, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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5219..7549
DNA (2331bp) protein (777aa)
Uncharacterized protein n=1 Tax=Eggerthella sp. CAG:209 RepID=R6H8V7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDB33245.1}; TaxID=1262875 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:209.;"
Protein of unknown function (DUF524)./Domain of unknown function (DUF2357).
L2_013_037G1_scaffold_321_6
unknown

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7662..8168
DNA (507bp) protein (169aa)

This feature has no annotations

L2_013_037G1_scaffold_321_7
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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8333..9520
DNA (1188bp) protein (396aa)
Protein tyrosine/serine phosphatase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W926_ATOPD
Tyrosine phosphatase domain protein {ECO:0000313|EMBL:EWC93706.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
protein tyrosine/serine phosphatase
L2_013_037G1_scaffold_321_8
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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9709..11634
DNA (1926bp) protein (642aa)
transcriptional antiterminator BglG (EC:2.7.1.69)
Uncharacterized protein n=1 Tax=Atopobium sp. oral taxon 199 str. F0494 RepID=S3AQB0_9ACTN
Phosphoenolpyruvate-dependent sugar PTS family porter, EIIA 2 component {ECO:0000313|EMBL:EWC94462.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
L2_013_037G1_scaffold_321_9
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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11637..11969
DNA (333bp) protein (111aa)
PTS system, cellobiose-specific IIA component n=1 Tax=Atopobium sp. oral taxon 199 str. F0494 RepID=S2ZNZ1_9ACTN
Putative lichenan-specific phosphotransferase enzyme IIA component {ECO:0000313|EMBL:EWC93699.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
PTS mannose transporter subunit IIA
L2_013_037G1_scaffold_321_10
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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11982..12305
DNA (324bp) protein (108aa)
Phosphotransferase system cellobiose-specific component IIB (EC:2.7.1.69)
PTS system, cellobiose-specific IIB component n=1 Tax=Atopobium sp. oral taxon 199 str. F0494 RepID=S3A8D5_9ACTN
PTS system, lactose/cellobiose-specific IIB subunit {ECO:0000313|EMBL:EWC93700.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
L2_013_037G1_scaffold_321_11
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12373..13746
DNA (1374bp) protein (458aa)
PTS system cellobiose-specific transporter subunit IIC (EC:2.7.1.69)
PTS system, cellobiose-specific IIC component n=1 Tax=Atopobium sp. oral taxon 199 str. F0494 RepID=S2ZQ32_9ACTN
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
L2_013_037G1_scaffold_321_12
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13829..14920
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Atopobium sp. oral taxon 199 str. F0494 RepID=S2ZW31_9ACTN
PF05913 family protein {ECO:0000313|EMBL:EWC93707.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
hypothetical protein
L2_013_037G1_scaffold_321_13
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15049..16428
DNA (1380bp) protein (460aa)
PTS system cellobiose-specific transporter subunit IIC (EC:2.7.1.69)
PTS system, cellobiose-specific IIC component n=1 Tax=Atopobium sp. oral taxon 199 str. F0494 RepID=S2ZQ32_9ACTN
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
L2_013_037G1_scaffold_321_14
Actinomyces europaeus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(16989..17888)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2VUY6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD31213.1}; TaxID=883069 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces europaeus ACS-120-V-Col10b.;"
hypothetical protein
L2_013_037G1_scaffold_321_15
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


18296..20356
DNA (2061bp) protein (687aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|SAAS:SAAS00182339};; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
glycoprotease family metalloendopeptidase (EC:3.4.24.57)
Metalloendopeptidase, glycoprotease family n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W929_ATOPD
Displaying 15 items

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