ggKbase home page

L2_013_043G1_scaffold_345_1

Organism: L2_013_043G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(2..1387)

Top 3 Functional Annotations

Value Algorithm Source
NusB/RsmB/TIM44 n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W755_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 462.0
  • Bit_score: 792
  • Evalue 1.80e-226
NusB family protein {ECO:0000313|EMBL:EWC92618.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 462.0
  • Bit_score: 851
  • Evalue 3.40e-244
NusB/RsmB/TIM44 similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 462.0
  • Bit_score: 792
  • Evalue 5.00e-227

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Atopobium sp. BS2 → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1386
ATGGCCACCTTAACTCCTGCTCGAAGAGTGGCCTATCAGGCATTCTTTGAGTGTAGACGCAATAATTTACGTATTCGTGATTACTTACGAGAGTCAAAAGATTTCTTGGAACTCTCTGTACAAGACAAAGCTTTTGCTACTCGTCTTGCTCTGGGGGCTACCCTCACAAAGGGCAAGCTTGATGAGGCTCTAAAGAATCATCTTAAGTCAAGTATTCATCTAGAGCCAAAGGTACAGGACGCTCTCCGTATTGCTGTATTTGAGGTTTTATATTTAGAGACTAGACGTGACGCCGCCATTAGCCAAGGTGTTGAGCTGGTAAAGTCTATCTCAAAGCGTTCTTCGGGTCTTGCAAATGCTGTGCTTAGAAAAATTTCTGAAAAAGAAGCTCAGCTTACGCGTGCCAAGAATCCCAAAACGCCTTCAGAGCTTTCGTGGGCGTCAGGTATTCCTGAATGGATTTGCTTGGAGATTATTGAGTCACTTGGAGAATCTGCTGCTCAAAAGCTCATTCTTAATTTAAAGAACTCCGCTCCTGTGTATGTCTTACAAAGAAACGTATCAGAGCAGCAATTGCAGAGCAGCTCTTTAGAGCTACAGCAAACAGTTCTGCCAGATGTGTATGAGGTAAAAAATCCTGCTCAACTTAACGTTGACGCATATGTAAAGAAAGTTCAGCTTGTTCCTGCAGATTTAGCTTCTCAACTTGTGGCTCTTCTTACCGCTTCCTATGCTCACCATGCTCTTCTTGAGGTTGGACAGGGCAGAGGAACTAAGTCCTTGCTGCTCTCTCATGCTTTTGAGGTACTTGGTAAAAAGGATGTTCCGATTACTGCGGTGGAGCTTATAAAGGGAAAGTCCCACGTTTCAAAAAGAAGATTGAAAACTGCTGGCCTTTCAGATCAAGTTACATCACTCACGTTTGACGCTACACAGTTTGTGTCACCAGAGGTTCCAGAAGAGCTTAATCAGAGCTTTGACGTGGTGTTTATTGACGCTCCCTGTTCTGGTTTGGGTACGCTTCGTCGTCACCCAGAGATTGCATGGAACCTGTCACCAGAAAGCCTGTATGACGGAGGAGAGCTTACCGTCTTACAGACCAAACTTTTGCAAAGCTGCAGTAGTCGTGTAGAGGTGGGCGGCTTTTTAGTCTATGCAACGTGCTCACTCTCAAATTCAGAGAATCAGCAGGTTGTAGATGATTTTCTTGCAAGCTCAGAGGGCTCTCATTTTGAGGTGCAAAGCCTTTTTGAGTGCCCCGCGCGCGCATGCTTAACGACAGATGCACAAGAGTTTCTCGATACGTGCATTACACCAGAGGGATTTTTGCAGACAGCTTTTGCGTCTGCTGATTGTGATGCTCACTTTATGGCGGTCCTTAAGCGC
PROTEIN sequence
Length: 462
MATLTPARRVAYQAFFECRRNNLRIRDYLRESKDFLELSVQDKAFATRLALGATLTKGKLDEALKNHLKSSIHLEPKVQDALRIAVFEVLYLETRRDAAISQGVELVKSISKRSSGLANAVLRKISEKEAQLTRAKNPKTPSELSWASGIPEWICLEIIESLGESAAQKLILNLKNSAPVYVLQRNVSEQQLQSSSLELQQTVLPDVYEVKNPAQLNVDAYVKKVQLVPADLASQLVALLTASYAHHALLEVGQGRGTKSLLLSHAFEVLGKKDVPITAVELIKGKSHVSKRRLKTAGLSDQVTSLTFDATQFVSPEVPEELNQSFDVVFIDAPCSGLGTLRRHPEIAWNLSPESLYDGGELTVLQTKLLQSCSSRVEVGGFLVYATCSLSNSENQQVVDDFLASSEGSHFEVQSLFECPARACLTTDAQEFLDTCITPEGFLQTAFASADCDAHFMAVLKR