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L2_013_122G1_scaffold_117_26

Organism: L2_013_122G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 17
Location: 28005..28754

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 249.0
  • Bit_score: 501
  • Evalue 3.60e-139
pseudouridylate synthase I (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 244.0
  • Bit_score: 289
  • Evalue 5.60e-76
tRNA pseudouridine synthase A n=1 Tax=Clostridium nexile CAG:348 RepID=R6QN22_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 249.0
  • Bit_score: 501
  • Evalue 2.60e-139

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Taxonomy

Clostridium nexile CAG:348 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 750
ATGAGAAATTATAAAATGATAATTGCATATGATGGTTCAAGATACAAAGGATGGCAGAGACAAAATCTGACCAATCTGACGATTCAGACAATTTTGGAACGTACGGTGGAGCAGATAGTTGGTTATCCGGTCGAAATTGATGGCTCCGGAAGAACGGATACGGGTGTTCATGCAAATGGCCAGGTGGCAAACATGAAAGTGTCGGGGCTTTTAGATGAGAGTTTTGTGGGAGAACTGAATTGTCTTTTGCCCGAGGATATCTGTGTGAAAGAAATGGAGCTTGTTCCTGGAAGTTTTCACAGCCGTTACAGTGCAAAGGCGAAAAAGTATAAGTATTGTATTGATACACGAAAGAAGCCGTGTGTTTTTACAAGAAGATATGCATATCATTTTACGAAGGAACTACATCTGGATGATATGAAGAAAGCGGCAGAGTATCTGAAAGGAACACATGATTTTTCAGCATTTACGGATAATAAAGACGAGAAATCAAAAGTGAGGACAATCTATGAGATTAAGATTGTAAAAAAAGGGACGAGGCTGGAGTTTGAATTTTATGGAACCGGATTTTTGTATCATATGGTGAGAATTCTGACAGGAACACTTTTGGAAGTAGGATGCGCAGAAAAGAGTATTGAAGATATAAAGATGGCTCTTGAACAGAAAGAACGAGAACTGACAGGCTTTTTAGCGCCGGCGAGAGGACTGTTTTTAGAAAAAGTATATTATCAGGAAGGAGAAGAAAGATGA
PROTEIN sequence
Length: 250
MRNYKMIIAYDGSRYKGWQRQNLTNLTIQTILERTVEQIVGYPVEIDGSGRTDTGVHANGQVANMKVSGLLDESFVGELNCLLPEDICVKEMELVPGSFHSRYSAKAKKYKYCIDTRKKPCVFTRRYAYHFTKELHLDDMKKAAEYLKGTHDFSAFTDNKDEKSKVRTIYEIKIVKKGTRLEFEFYGTGFLYHMVRILTGTLLEVGCAEKSIEDIKMALEQKERELTGFLAPARGLFLEKVYYQEGEER*