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L2_013_122G1_scaffold_5503_2

Organism: dasL2_013_122G1_concoct_43_fa

near complete RP 49 / 55 MC: 2 BSCG 47 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(1189..1473)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=3 Tax=Haemophilus parainfluenzae RepID=E1W486_HAEP3 similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 94.0
  • Bit_score: 183
  • Evalue 5.80e-44
HF-I, host factor for RNA phage Q beta replication similarity KEGG
DB: KEGG
  • Identity: 97.9
  • Coverage: 94.0
  • Bit_score: 183
  • Evalue 1.60e-44
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=862965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae (strain T3T1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 94.0
  • Bit_score: 183
  • Evalue 8.20e-44

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Taxonomy

Haemophilus parainfluenzae → Haemophilus → Pasteurellales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGGCAAAAGGACAATCATTACAAGATCCTTATTTGAATGCGTTACGCCGTGAACGTATTCCTGTTTCGATTTATCTCGTTAATGGGATTAAATTACAGGGTCAAATCGAATCATTCGACCAATTCGTGATTTTATTAAAAAACACTGTTAATCAAATGGTGTACAAACACGCTATTTCAACTGTGGTTCCAGCACGTTCTGTTTCTCACCACAATAATACCGGCGGTCATCATGCAGCACAAACTTCTGACGCTGCAGCGGAAGTAGAAACACAAGCAGAATAA
PROTEIN sequence
Length: 95
MAKGQSLQDPYLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVNQMVYKHAISTVVPARSVSHHNNTGGHHAAQTSDAAAEVETQAE*