ggKbase home page

L2_013_122G1_scaffold_388_1

Organism: dasL2_013_122G1_concoct_57_fa

near complete RP 48 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(1..2247)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase K/L n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W7K3_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 750.0
  • Bit_score: 1367
  • Evalue 0.0
Ribosomal RNA large subunit methyltransferase K/L {ECO:0000256|HAMAP-Rule:MF_01858}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 749.0
  • Bit_score: 1452
  • Evalue 0.0
THUMP domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 92.7
  • Coverage: 750.0
  • Bit_score: 1367
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Atopobium sp. BS2 → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2247
ATGTCTCAAGAACTTGAGTTCTTTGCAACGTGTCCAAAAGGCTTTGAGAAGCTTCTTGCACAGGAGCTTGACGGCCTGCGCATCAAAAAGGTGCGTCCTCTTGGCGGACAGGTTGCGTTTTACGGCTCACTTGCCGATGCTTACCGCGTCTGTTTATGGTCTCGTCTCACGTCTCGCGTCATTTTGGTGCTTGATCGCGTTGGCGCTGCAACTTCAGACGCTCTCTACGAAGGCCTCTCCCACATTGCTTGGGAAGACCATATTGGTCCGCATGCCACCATTGCAGTCAGCGCTCACGGCACAAATGACCAGCTCAGAAACACCAACTTCATTGCTGTCAGAACAAAAGACGCTATTGTAGACCGACTTGCAGCAAAGCGCGGAAGCCGTCCTATGGTCAACACGCTTGCACCTGACGTAACTATTGTCGTGCGCGTCTCACGCAACCGCGCCACAGTTGGCATTGACCTTGCTGGTGAAGCGCTCTTTAAGCGCAGTCTGACTGGCGGTCGAGGGCCGGCACGTGAGTTTGCGCCGCTCAGGCTGGACTACGCTGCTGCCCTTCTGTACCTGCAGGCGCAAACTGCCGCGAGTGCACCGGGTTTCTCGCCAGATGTGCCGCTGCCGGCGCTGCTGTTCCCGGGAGCAGGCGCGCTTGCACAGGAGGCAGCGGGCATGGCGCTGGACGTGGCGCCGGGCATTCTACGCGCTCGCTGGGGCATGACGGGATGGGCTGGCCACGACGACGATGCCTGGCAGGATTTGCTTGTCGAGGCTGATGAACGTGCCGAGAAGGGCCAAGAGCGCCAGATCACACTCTATGCAGCGGACCCTCGCCCAAAGGCCAAAGAGGCTGTGCTTTATACGCTTCGTGCAGGCGGGCTCAAGGCTGACGTGCAGTTCTTGGCAGCTTCTGAGCTGCTCAAACATGCAGAGCACTTCACGGGCATTGTTGCCGATCTCTCGTGGACCAAAGAAGAGCCCACACTCCAGGGTTCTGCTTACGCTACGCTTGGACTTTTTGCGGGACAGGCAAGCACGCTTCTTACCAGCGATACAAATACTGATACGGTACTCAGAGCAACTCCATCGCAGACACTTTCTGTCTACGTGGGCAACTCCATTGCCACCATGCGCTGCTACCCTGCCGCGATCGCAGAGAAAGCAGGTGGCAGCGAAGCTGATGCCACTGCACCTGCAAGCAACTCCGAGCTTATCTCGGTTCCTGCAGGTCCTACTGTCATGGTTAACAACCAGCCAGTAAGCGTACTGGTTCCTGCATCAGATCAATTTGCCGCACGCCTTGCTAAGGTGGCCAAGCAACGCGCTAAGTGGGCTCGTAAAAACGACGTCTCGTGTTACCGCGTATATGACGCTGACCTGCCCGATTATGCCGTCAGCATTGACATCTACAAGGGCGCCACAAAGCCAACTACCTGGCTGCAAATCTCTGAGTACGCTGCATCTAAAGAGATTGATCCAGACCTTGCAAAGCGTCGCCTCCTAGACGTCCTAGCTCTGGCCCCTCGCATTCTAGGCGTACCTAGCTCAAACGTAAATCTACGAACAAGAACGCGTGCAAAAGGTGGCTCTCAGTACTCTGACGAGGGCAGCGCTGCAGACAACTCCAGAAAAGAAATGTTGCTCATCGATGAGGGCGGCCTACTCTTTGAGGTCAACTTTGCATCCAGACTGGACTGTGGAATCTTCTTGGATCACCGCGATACACGTGCAGAAATTCGTGAGCTCATGAAAAGCGCCGGACCTGCTAAGAGCTTCCTCAATCTCTTTGCCTACACAGGTACCGCTACCTGCTACGCAGCAGATGGTGGCGCGCTTCACTCCACAACCGTTGACCTCTCCAAGCCTTCGCTTGAGTGGGCCAAGCGCAACATGAAGCGCAACGGTTTTGACGGCGAGGAACACGAGTTTGTCCAGGCAGACGTCCTATCTTGGATTACCGAGATGCGTCATACCAAAAATCGCTGGAACGTCATCTTCTGCGACGTCCCCACCTTCTCTAACTCATCGCGCATGAGGCAAAGCTCGTTTGATGTCCAGAGAGATCACGCTGAGCTTATTATTGGCATTTCTCGCCTTCTGACTCGTGGTGGCGTTGCCATTTTCTCGTGCAACCTGCGTACCTTTAAGCCAGATGTCGAGAAAATCCAGCGAGCTGGCGTCGACATTGAAGACATAACAAGTGAAACTATTCCGGAGGACTTCTCAAGAAATCAGAAGATCCAT
PROTEIN sequence
Length: 749
MSQELEFFATCPKGFEKLLAQELDGLRIKKVRPLGGQVAFYGSLADAYRVCLWSRLTSRVILVLDRVGAATSDALYEGLSHIAWEDHIGPHATIAVSAHGTNDQLRNTNFIAVRTKDAIVDRLAAKRGSRPMVNTLAPDVTIVVRVSRNRATVGIDLAGEALFKRSLTGGRGPAREFAPLRLDYAAALLYLQAQTAASAPGFSPDVPLPALLFPGAGALAQEAAGMALDVAPGILRARWGMTGWAGHDDDAWQDLLVEADERAEKGQERQITLYAADPRPKAKEAVLYTLRAGGLKADVQFLAASELLKHAEHFTGIVADLSWTKEEPTLQGSAYATLGLFAGQASTLLTSDTNTDTVLRATPSQTLSVYVGNSIATMRCYPAAIAEKAGGSEADATAPASNSELISVPAGPTVMVNNQPVSVLVPASDQFAARLAKVAKQRAKWARKNDVSCYRVYDADLPDYAVSIDIYKGATKPTTWLQISEYAASKEIDPDLAKRRLLDVLALAPRILGVPSSNVNLRTRTRAKGGSQYSDEGSAADNSRKEMLLIDEGGLLFEVNFASRLDCGIFLDHRDTRAEIRELMKSAGPAKSFLNLFAYTGTATCYAADGGALHSTTVDLSKPSLEWAKRNMKRNGFDGEEHEFVQADVLSWITEMRHTKNRWNVIFCDVPTFSNSSRMRQSSFDVQRDHAELIIGISRLLTRGGVAIFSCNLRTFKPDVEKIQRAGVDIEDITSETIPEDFSRNQKIH