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L2_013_122G1_scaffold_388_32

Organism: dasL2_013_122G1_concoct_57_fa

near complete RP 48 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 38683..39273

Top 3 Functional Annotations

Value Algorithm Source
Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W7H2_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 95.9
  • Coverage: 196.0
  • Bit_score: 374
  • Evalue 4.90e-101
Ribosomal subunit interface protein {ECO:0000313|EMBL:EWC94113.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 196.0
  • Bit_score: 382
  • Evalue 1.90e-103
sigma 54 modulation protein/30S ribosomal protein S30EA similarity KEGG
DB: KEGG
  • Identity: 95.9
  • Coverage: 196.0
  • Bit_score: 374
  • Evalue 1.40e-101

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Taxonomy

Atopobium sp. BS2 → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 591
ATGGTGGACATCAAGATTTCGGGACGCAAGGTAAGCATTTCTGAGGCTTTGCGCACACACGTAGATCAGAAAATCGGTGATGCTCTTAAAGTATTTGACATCACTCCTATGTCTTGCGATGTAGTTCTCAGAGTAGACAAAAACCCTTCAAATCCAGATAGAAAGACAGCTGAGGTTACGGTATTTGTTCGTAACAATGTTGTTCGTGTCACTGCTAGCTCTGACGATATGTATGTGGCTATTGATGAAGCAGCAGAAAAAGTCTCCAGACAACTACGCAAGTACAAGACAAAAGTTGTTGAGCGCCGTCATCATGTAAAGTCTGAGCGCGGAGTTGCTCTTACACAAGAAGATCTTGCCAATCTCATTGAGATTCCAGCTGAAGATCTTGATGACCAGCTTGTTCGCGAGAAATACATTGATCTTGAGCCAATGACGGAAGAGGAGGCGCTTGTCCAAACTGACCTTCTCGGCCATGATTTTTATGTCTTTGTTAATTCTTCTACTGGTTTGACTAATGTCATTTACCATCGTAAAAATGGTGGATACGGAATTATCAAACCTAAGATTGAGGAACAGGATGTTCAATAA
PROTEIN sequence
Length: 197
MVDIKISGRKVSISEALRTHVDQKIGDALKVFDITPMSCDVVLRVDKNPSNPDRKTAEVTVFVRNNVVRVTASSDDMYVAIDEAAEKVSRQLRKYKTKVVERRHHVKSERGVALTQEDLANLIEIPAEDLDDQLVREKYIDLEPMTEEEALVQTDLLGHDFYVFVNSSTGLTNVIYHRKNGGYGIIKPKIEEQDVQ*