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L2_013_122G1_scaffold_2309_1

Organism: dasL2_013_122G1_concoct_57_fa

near complete RP 48 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(3..695)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.7
  • Coverage: 231.0
  • Bit_score: 456
  • Evalue 1.20e-125
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W6X2_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 231.0
  • Bit_score: 445
  • Evalue 2.00e-122
MiaB-like tRNA modifying protein YliG similarity KEGG
DB: KEGG
  • Identity: 96.1
  • Coverage: 231.0
  • Bit_score: 445
  • Evalue 5.70e-123

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Taxonomy

Atopobium sp. BS2 → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGGCCAGCCCCTCCAGTTCAATAACTATCGATAGGGGCTACAACGTCCTATACATCACGTTAGGATGCGCTAAAAACGAGGTTGATACAGACCGCATGCGTGCGCGTCTTTTGGCCTCTGGTTTTGGTGAAGTTGCCGATCCAGACTCAGCAGACATAGCAATTATCAACACCTGTTCATTCTTGGCTTCAGCAACAGAGGAGTCCATTGAAGCTACGCTTGAGATTGCTGAGGGCGCTTCCGAGGGAGTCCGTAAGCTGCCCATTATTATGTGTGGCTGCGTTCCTTCCAGGTATGGCGCAGAGCTTAACGAGCAGCTTCCTGAAGTTGCTGCGTTTGTTCCGGCAGATCAAGAAGATGGTATTGTCAGCGTTGTTGCAGACGTTCTGAATATCCCTGAGCCTACGCAGTCAATTGTTGCTGCCCATGGAATGCTGCGCACCATTGATGGCGCCAGTGCATTTGTAAAGATTTCCGAGGGCTGTGATAGATTCTGTGCCTTCTGCGCCATTCCGTACATTCGTGGTCACTATCACTCAAGGCCTGCTGAAGAGATTCTTCAAGAGGTACATGAGCTGATGGAAGGTGGTGTTCGTGAGGTCATTCTGATTGGCCAGGACACCGGTATCTGGGGCTCGGATATGCCTGATACAGCAGATGGTCAGACGCCAACGCTTGCTAAGCTTATGCAG
PROTEIN sequence
Length: 231
MASPSSSITIDRGYNVLYITLGCAKNEVDTDRMRARLLASGFGEVADPDSADIAIINTCSFLASATEESIEATLEIAEGASEGVRKLPIIMCGCVPSRYGAELNEQLPEVAAFVPADQEDGIVSVVADVLNIPEPTQSIVAAHGMLRTIDGASAFVKISEGCDRFCAFCAIPYIRGHYHSRPAEEILQEVHELMEGGVREVILIGQDTGIWGSDMPDTADGQTPTLAKLMQ