ggKbase home page

L2_013_122G1_scaffold_1630_7

Organism: dasL2_013_122G1_concoct_57_fa

near complete RP 48 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 5223..6062

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 279.0
  • Bit_score: 546
  • Evalue 1.90e-152
Pseudouridine synthase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8WAL4_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 279.0
  • Bit_score: 529
  • Evalue 1.70e-147
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 93.9
  • Coverage: 279.0
  • Bit_score: 529
  • Evalue 4.70e-148

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Atopobium sp. ICM42b → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 840
GTGGCAGAAGAGCGTATTGTCCCCATGCGCCTGCAGCGCTTTTTGGCGCGCGCAGGAGTGGCTAGTCGCCGTGGCTCCGAGCGCCTGATGACCTCTGGTCGTGTCACGGTAAACGGCCAGGTAGTCACCGAGCTTGGCAGTAAGGTTGATCCGCTGGTAGATGTTGTTGCAGTTGACGGTATTGTCTGCTCAATTGCCGAGAAACCCGTCTACTTGATGCTCAACAAACCTGCAGGGTATCTGACCACTATGAAAGATCCCCAGGGTAGACCAACCATTGTGGACATGGTTCCCACTGACAGATACCCGGGACTTTTCCCTGTTGGACGTCTTGATATGGATACCACGGGTCTTTTGTTCTTTACTACCGATGGCCAGATGGCACAAGAGCTTTTGCATCCCTCAAAGCATGTATGGAAGCACTATGTTGCTCATGTAGTAGGTACACCTACAGAAGAGCAGCTAAATCGCCTGCGTGAAGGTATTGAGCTTGAAGATGGTCCTGCTGCTCCTGCTGAGGTTGAGATTGTATCCAACGATGCCAAGATGAAGGCACTTCTCGCCCCACAGGGTTTAGGAAAAATCGGTGGAGGAGAGCCAAACTCCCTGGTCAGCGTAACTATTAGAGAAGGCAGAAAGCACCAGGTTAAGAAAATGCTTCTGGCTATTCACCATAGAGTTCTTGCACTCCACAGAGACACGTTTGGGCCGCTTCACCTTACAGGCGTTAAAGAAGGACAGTGGAGACTTCTTACCGATGAGGAAGTTGCCTCTCTGGAGCGCACTATTGGTAGAGAGCCTGGTGCTTCTCCCATCATGCCTTTACATGCCAGCAAATAA
PROTEIN sequence
Length: 280
VAEERIVPMRLQRFLARAGVASRRGSERLMTSGRVTVNGQVVTELGSKVDPLVDVVAVDGIVCSIAEKPVYLMLNKPAGYLTTMKDPQGRPTIVDMVPTDRYPGLFPVGRLDMDTTGLLFFTTDGQMAQELLHPSKHVWKHYVAHVVGTPTEEQLNRLREGIELEDGPAAPAEVEIVSNDAKMKALLAPQGLGKIGGGEPNSLVSVTIREGRKHQVKKMLLAIHHRVLALHRDTFGPLHLTGVKEGQWRLLTDEEVASLERTIGREPGASPIMPLHASK*