ggKbase home page

L2_013_122G1_scaffold_1766_4

Organism: dasL2_013_122G1_concoct_57_fa

near complete RP 48 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 2328..3008

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8T8_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 226.0
  • Bit_score: 426
  • Evalue 1.60e-116
Putative transcriptional regulatory protein CutR {ECO:0000313|EMBL:EWC94421.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 226.0
  • Bit_score: 436
  • Evalue 2.20e-119
winged helix family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 96.0
  • Coverage: 226.0
  • Bit_score: 426
  • Evalue 4.60e-117

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Atopobium sp. ICM42b → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 681
TTGAAAATCCTTGTAGTGGAAGATGAAAAAGAGCTTCTTGCCTCTATTGGAGAGGGGCTTGAGCTGGACGGTTATTACGTTGATCTTGTCGACAACGGCACTCAGGCTCTTGAAATGGCTCAGCTTGAGCAATATGACCTGATTCTACTTGACCTTAACCTTCCTGGTATCGATGGGCTTGATTTGCTGCGTACGCTACGGGCGGAGCACTCAGAGACTAAGGTGCTGATTCTTTCTGCGCGTTCATCGGTGTCTGATCGCATTGTTGGATTAGATGCAGGTGCTGATGACTACCTTATAAAACCCTTTGCGTTTGGTGAGCTCGAGGCCCGTATTAGGACGCTCCTGCGCCGCGAATATACGCATGGAGAAGCATCTTTGACGTTGGGAGAACTTCGGTTTGACACTACGGCTCGACAAGTTTTTGTTGGGGATTCTCAGGTTAATTTCACCAAGAAAGAACTCGCAATTCTAGAGTATCTGATGCGACATGCTGGAGCGGTTGTGAGCAGTGAAGAGCTCATGACTCATGCGTGGGATAGCAACGTGGACTTATTCAGCAATTCTGTGCGTGTTCACATTTTTTCGGTACGAAAAAAGTTACGAGAAGCTCTTGGATATGACCCAATTTCTAACAAAGTAGGAGAGGGTTATTGCTTTAAGAGGGACAGCAATGACTAA
PROTEIN sequence
Length: 227
LKILVVEDEKELLASIGEGLELDGYYVDLVDNGTQALEMAQLEQYDLILLDLNLPGIDGLDLLRTLRAEHSETKVLILSARSSVSDRIVGLDAGADDYLIKPFAFGELEARIRTLLRREYTHGEASLTLGELRFDTTARQVFVGDSQVNFTKKELAILEYLMRHAGAVVSSEELMTHAWDSNVDLFSNSVRVHIFSVRKKLREALGYDPISNKVGEGYCFKRDSND*