ggKbase home page

L2_013_122G1_scaffold_1052_11

Organism: dasL2_013_122G1_concoct_57_fa

near complete RP 48 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 14613..15224

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W7M0_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 203.0
  • Bit_score: 352
  • Evalue 2.00e-94
Type II secretion system protein F {ECO:0000313|EMBL:EWC94279.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 203.0
  • Bit_score: 392
  • Evalue 1.90e-106
type II secretion system protein similarity KEGG
DB: KEGG
  • Identity: 88.7
  • Coverage: 203.0
  • Bit_score: 352
  • Evalue 5.80e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Atopobium sp. BS2 → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGGATTTACTATGCTCCGTATTATTTGCAACATGCATAGGTATTCTCGCCCTAGTTGTTCCCGTCAATTTGAATCATTTTGATGTCCATAGCTATTATCAGCAAATTATAAGAGGCATAAAAAGTCACAAGAGAATGAGCCTCCGGGCAAAGTCTGAGTTTACAAGAAAATCATGCCTACGTGAGATGCCAGAAATGATTGACATTTTGATTCTTGGGCTGTCATCAGGGCTATCTTTTGATTCAGCGCTTGATCTGTATTGTTTGCGAGAATCTGGAGAATTATCGAGAGAGCTTTCAAATGCTCATATGACTTGGAAGCTTGGTGCTACTACTCGCGAAGAAGCACTCAATCAGATGGCGGCAAAAGTAGGAGTTCCATCGCTTAAAAGCTTTGCGACTGTTGTGAATGAAGCGCTTACTTTTGGAACTCCTCTTGCAGAAATATTAGATAGACAAGCTTCAGTTCTTCGCGATGAGCAGCGTTCGCTGTTAGAAACGGAAATTGAAAAGATCCCAATTAAAATGCTCATCCCTCTAGGAACGCTGATTGTTCCAGCAATGTTACTTGCAATTTTAGGTCCCTTGCTTGGACCTGCATTTTCTTCTTAA
PROTEIN sequence
Length: 204
MDLLCSVLFATCIGILALVVPVNLNHFDVHSYYQQIIRGIKSHKRMSLRAKSEFTRKSCLREMPEMIDILILGLSSGLSFDSALDLYCLRESGELSRELSNAHMTWKLGATTREEALNQMAAKVGVPSLKSFATVVNEALTFGTPLAEILDRQASVLRDEQRSLLETEIEKIPIKMLIPLGTLIVPAMLLAILGPLLGPAFSS*