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L2_013_122G1_scaffold_1442_1

Organism: dasL2_013_122G1_concoct_57_fa

near complete RP 48 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(1..2943)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 981.0
  • Bit_score: 1894
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8X2_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 981.0
  • Bit_score: 1875
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 97.9
  • Coverage: 981.0
  • Bit_score: 1875
  • Evalue 0.0

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Taxonomy

Atopobium sp. ICM42b → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2943
GTGTTTATCAATAGAGTTGCAGCTCAACTACTGAGCGCACCCGAGCTAGAGAAGCTGAAACGAGAGCTTTCGCGCGGATCAGACGCCACGCTATCCCTCTCGCAAAGCGCTCGTCCGCTGATGCTGGCTGCGCTCTGGGCGCAGAATCCTCGACCGTGCCTGCTAGTCGTTGCGGGAGAGGACGCCGCGGACCGCACGGCGCGCTCGCTCGCGGCATGGCTGGGCAACGACGCCGTGCTGCGCTACCCCAACCGCAAGGATCGCCCCTGGTCAGATACCACGCCAGACGACGCCCTTATTGGAGCCAGATGTCGCGCTATCGCCAAGCTTTCCGCTGGCGAGAAGGTCATTGTAGTCGCAAGCGCCCACGCGCTGATGCGCAGAGTTCCCCCTGTTGGTTCGGGCTATTTTCTTCCTGCAACGTTCACCGTTGGCGACGACGTCCCCTTTGAGGACGTAGCTTCGCTGCTCGTGGGTATGGGATACGCCGACACCGGCGAGGTAGACGTGCCAGGCACCTTCCACATTCACGGCGATACCGTTGATATCTTCCCAGCTCAGGCAACAAGTCCCGTGCGTATTGAGTTCTTCGGAGACGAGATTGACCGCATCAGGCGCATGGTGGCAGCAACCGGACAGACTATCGGTGCCATTGATGAGGTTACCGTTGCCCCAGCTAGAGAGCTTGCGTTTACCAAAGAAACCATTCGCCGCGCAGAAGAAGCGCTCTACACGCGCGCGCAAGAAAACTCTGCACTCGCCGCTGACCTGGAGCTTATTCAGCGCGGAGCTCAGGCTCCTGCACTTGAGCGCTATCTTCCCGTGTTATACGGAGGCACTGCCAGCCCGCTTGAGCACATCTCTTCAGAGACGCTGGTAGTTCTTGCGGAGCCACGCTCGCTATTTGACGATTGTCAGCGTGCCTTTGACGAAATTTCTGCATCCGCAACAGTATCAAAAGTGAAACTAGATGGTCTGTATACAGATCCCAAGGCCATGGATTTTGGCTCGCAGCAGCGTTTGTCCTTCTCGTCACTTCTACGTACGGGATCTGCGGTAACGTCGGAGCTCTCTGTGGTGCAGCCGTCTATTGCGGGTTCAGATACAAAGCTTTTGGGTCGCGTAAGGCAGCTGGTGCAAGACCGCGATGCTGTGGTATTTGCGGTTCCAGACCGCGCCGCTCGAGAGCACCTCAAGTTGCTTTTCTCGGATGAGTCCATTCCGTTTGAGGAGTCGCTGGGTACGGCGCTTGAAAACGAGCCTGATCAAAACGGTGCTTACGCGCCACTCAAGCGTGGTCGCGTCACGTTTACCGATGCACCTGTTCCCGCCGGAATCATTATCCCTACAGCTAACCTAGCAGTGCTTTCTGTCTCGGACTTGACGGCCAGAAGCGCGCGCAACAAGAAGCACTCCAAACGTATTGACCCCAAAACGGTGACGTTCCCGTTTAAGCCGGGTGACTACGTTGTCCACGCAACGCACGGTATTGCGCACTTTACAGCTATTGTGCGTCAAAAAGTTGCAGGTAGAGAGCGTGATTACTTCCTGCTTGAGTATGCCAATGACGATAAACTCTATGTGCCCCTGGAGCAGGTTGACCGCATTACGCGCTATGTAGGACCTGACGGCAATAATCCACGCCTGACCAGGCTTAACACGGCGGATTGGTCGCGCGCTACTAACAAGGCAAGAAAATCTGCCAAGAAACTGGCATTTGACCTAGTAGACCTCTATACACGTCGCGCTTCGGTGCCGGGCTATGCGTTCTCGCTGGACACTCCCGCTCAGGAGGAGATGGAATCCAGCTTCCCGTATCAGCTGACGCCAGACCAAGAAAGCGCAGTTGCAGACATTAAGCTGGACATGGAAGCGCGCAAGCCAATGGATCGTCTACTTTGCGGCGACGTGGGCTTTGGCAAGACAGAGGTGGCGCTGAGAGCTGCATTCAAGGCATGCCAGGATGCTCGCCAGGTTATGATTTTGTGCCCAACTACCATCTTGGCTCAGCAACACTACGAGACGTTTTTCTCGCGATTTGCTCCGTTTGATTTGAAGGTAAGCGTGCTTTCACGTTTTGTCACACCTGCCCAGCAGAGAAAAGCGCTTGAGGGATTTGCGGACGGAACCGTAGATGTGCTGGTAGGAACTCATAGGTTGCTTTCAGCTGACGTCAATCCACACGACTTAGGCTTGGTTATCATCGACGAAGAGCAGCGCTTTGGCGTGCAGCACAAAGAGCAGCTCAAAAACATGCGCGAGCAGGTAGACGTGCTGACACTCTCGGCAACGCCAATTCCGCGCACCATGCAGATGGCCATGAGCGGCGTTCGTGACATGAGCCTGATTCTAACGCCACCGCCTGGCAGAAAGCCTGTTCAGGTGATGGTGGGCGAGTACAACCCGGATCTTGTTTCCGCAGCTATTAGAAGTGAGCTGGAGCGAGAAGGACAGGTGTACTACGTGTCCAACCGCGTGACCACTATTGATGAAGCGGTGGCTCGCGTGGAGGAAGCTGCGCCGGAGGCTCGTGTGGGCGTGGCTCACGGCCAGATGAGTGCTCGCGAGGTAGAGAACGTTATGCTTGCCTTCCAGGAGCACGAGATTGACGTTTTGGTGGCCACCACCATCATTGAGTCCGGCATTGACAACTCGCACACTAACACGCTGATTATCGAGGACTCTCAGCGTTTGGGACTGGCTCAGTTGTATCAGCTCAAGGGCCGTGTTGGTCGCGGTAGGCAGCAGGCGTACGCGTATTTTATGTTCCCGGCGGAGTTGCCGCTGACGGAAGAGGCAACCGAGCGTTTGACGGCAATCAACGAGTTCCAGGACCTGGGTAGCGGCATGCGTATTGCCATGCGTGACCTGGAGATTAGAGGCGCCGGCTCTCTTATGGGCGCTGAGCAGCACGGAAACCTTTCCAGCGTTGGCTTTGACCTC
PROTEIN sequence
Length: 981
VFINRVAAQLLSAPELEKLKRELSRGSDATLSLSQSARPLMLAALWAQNPRPCLLVVAGEDAADRTARSLAAWLGNDAVLRYPNRKDRPWSDTTPDDALIGARCRAIAKLSAGEKVIVVASAHALMRRVPPVGSGYFLPATFTVGDDVPFEDVASLLVGMGYADTGEVDVPGTFHIHGDTVDIFPAQATSPVRIEFFGDEIDRIRRMVAATGQTIGAIDEVTVAPARELAFTKETIRRAEEALYTRAQENSALAADLELIQRGAQAPALERYLPVLYGGTASPLEHISSETLVVLAEPRSLFDDCQRAFDEISASATVSKVKLDGLYTDPKAMDFGSQQRLSFSSLLRTGSAVTSELSVVQPSIAGSDTKLLGRVRQLVQDRDAVVFAVPDRAAREHLKLLFSDESIPFEESLGTALENEPDQNGAYAPLKRGRVTFTDAPVPAGIIIPTANLAVLSVSDLTARSARNKKHSKRIDPKTVTFPFKPGDYVVHATHGIAHFTAIVRQKVAGRERDYFLLEYANDDKLYVPLEQVDRITRYVGPDGNNPRLTRLNTADWSRATNKARKSAKKLAFDLVDLYTRRASVPGYAFSLDTPAQEEMESSFPYQLTPDQESAVADIKLDMEARKPMDRLLCGDVGFGKTEVALRAAFKACQDARQVMILCPTTILAQQHYETFFSRFAPFDLKVSVLSRFVTPAQQRKALEGFADGTVDVLVGTHRLLSADVNPHDLGLVIIDEEQRFGVQHKEQLKNMREQVDVLTLSATPIPRTMQMAMSGVRDMSLILTPPPGRKPVQVMVGEYNPDLVSAAIRSELEREGQVYYVSNRVTTIDEAVARVEEAAPEARVGVAHGQMSAREVENVMLAFQEHEIDVLVATTIIESGIDNSHTNTLIIEDSQRLGLAQLYQLKGRVGRGRQQAYAYFMFPAELPLTEEATERLTAINEFQDLGSGMRIAMRDLEIRGAGSLMGAEQHGNLSSVGFDL