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L2_013_245G1_public_UNK

In projects: L2_013_245G1_public

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 57.95 Longest contig: 538.61 Kbp Bin length: 89.30 Mbp GC content: 48.07 %
Contigs count: 19835 Features count: 98731 rRNAs count: 18 tRNAs count: 1481

Genome completeness

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 16
Displaying items 601-650 of 19835 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L2_013_245G1_scaffold_7389
Species: Clostridium sp. D5 (66.67%)
3 3704 bp 43.74 7.78 100.35
L2_013_245G1_scaffold_16584
Species: Lachnospiraceae bacterium 5_1_63FAA (50%)
2 1148 bp 45.21 5.62 100.35
L2_013_245G1_scaffold_9697
Order: Clostridiales (66.67%)
3 1722 bp 51.86 2.96 100.35
L2_013_245G1_scaffold_12305
Species: Firmicutes bacterium CAG:424 (100%)
2 1438 bp 43.88 3.34 100.35
L2_013_245G1_scaffold_16469
Species: Coprococcus catus (100%)
2 1154 bp 55.63 5.72 100.35
L2_013_245G1_scaffold_16380
Species: Lachnospiraceae bacterium CAG:364 (50%)
2 1160 bp 39.57 3.62 100.35
L2_013_245G1_scaffold_16205
Species: Peptoclostridium difficile (50%)
2 1169 bp 48.16 5.65 100.34
L2_013_245G1_scaffold_3847
Species: Clostridiales bacterium 1_7_47FAA (66.67%)
3 3806 bp 54.91 5.79 100.34
L2_013_245G1_scaffold_11926
Species: Ruminococcus sp. SR1/5 (50%)
2 1471 bp 53.84 3.57 100.34
L2_013_245G1_scaffold_9271
Species: Eubacterium sp. 3_1_31 (50%)
2 1782 bp 33.05 4.80 100.34
L2_013_245G1_scaffold_15749
Species: Clostridiales bacterium 1_7_47FAA (50%)
2 1193 bp 49.37 4.65 100.34
L2_013_245G1_scaffold_15538
Species: Roseburia intestinalis (50%)
2 1205 bp 46.14 2.24 100.33
L2_013_245G1_scaffold_15334
Species: Coprococcus catus (50%)
2 1217 bp 40.92 3.45 100.33
L2_013_245G1_scaffold_5473
Species: Erysipelotrichaceae bacterium 6_1_45 (100%)
3 2766 bp 55.39 6.78 100.33
L2_013_245G1_scaffold_7320
Species: Enterococcus faecium (50%)
2 2153 bp 32.00 9.13 100.33
L2_013_245G1_scaffold_8802
Species: Clostridium sp. ASF356 (50%)
2 1854 bp 39.81 3.24 100.32
L2_013_245G1_scaffold_14945
Species: Clostridium sp. CAG:58 (100%)
2 1241 bp 58.02 3.75 100.32
L2_013_245G1_scaffold_11125
Species: Clostridium sp. KLE 1755 (50%)
2 1552 bp 45.75 4.64 100.32
L2_013_245G1_scaffold_14804
Species: Erysipelotrichaceae bacterium 6_1_45 (50%)
2 1250 bp 50.40 4.08 100.32
L2_013_245G1_scaffold_10996
Species: Peptoclostridium difficile (50%)
2 1564 bp 45.33 3.84 100.32
L2_013_245G1_scaffold_7138
Genus: Clostridium (66.67%)
3 2198 bp 56.37 4.03 100.32
L2_013_245G1_scaffold_6067
Species: Erysipelotrichaceae bacterium 6_1_45 (50%)
2 2521 bp 47.52 6.19 100.32
L2_013_245G1_scaffold_7077
Species: Enterococcus faecium (100%)
3 2216 bp 42.73 2.84 100.32
L2_013_245G1_scaffold_14529
Species: Lachnospiraceae bacterium 9_1_43BFAA (100%)
2 1268 bp 42.82 4.50 100.32
L2_013_245G1_scaffold_8471
Species: Clostridium sp. FS41 (50%)
2 1914 bp 49.06 4.78 100.31
L2_013_245G1_scaffold_14350
Species: Firmicutes bacterium CAG:646 (100%)
2 1280 bp 42.34 3.28 100.31
L2_013_245G1_scaffold_14137
Species: Ruminococcaceae bacterium 585-1 (50%)
2 1295 bp 58.30 3.71 100.31
L2_013_245G1_scaffold_5124
Species: Clostridiales bacterium 1_7_47FAA (100%)
2 2928 bp 56.45 6.15 100.31
L2_013_245G1_scaffold_2656
Species: Lachnospiraceae bacterium 7_1_58FAA (58.33%)
12 7193 bp 57.86 6.57 100.31
L2_013_245G1_scaffold_5004
Species: Clostridiales bacterium 1_7_47FAA (100%)
2 2982 bp 54.02 5.33 100.30
L2_013_245G1_scaffold_10170
Species: Lachnospiraceae bacterium 6_1_63FAA (66.67%)
3 1663 bp 43.90 4.33 100.30
L2_013_245G1_scaffold_19614
Species: Anaerotruncus colihominis (100%)
2 1011 bp 51.73 5.93 100.30
L2_013_245G1_scaffold_19619
Species: [Clostridium] bolteae (100%)
2 1011 bp 48.17 7.12 100.30
L2_013_245G1_scaffold_9976
Species: Anaerostipes sp. CAG:276 (50%)
2 1687 bp 46.47 6.58 100.30
L2_013_245G1_scaffold_7915
Species: butyrate-producing bacterium SS3/4 (66.67%)
3 2025 bp 52.15 5.11 100.30
L2_013_245G1_scaffold_19545
Species: Subdoligranulum sp. 4_3_54A2FAA (50%)
2 1014 bp 58.88 4.73 100.30
L2_013_245G1_scaffold_19299
Species: Intestinibacter bartlettii (50%)
2 1023 bp 25.81 7.04 100.29
L2_013_245G1_scaffold_13182
Species: Subdoligranulum variabile (100%)
3 1364 bp 65.76 3.96 100.29
L2_013_245G1_scaffold_13187
Species: Firmicutes bacterium CAG:95 (100%)
2 1364 bp 53.01 3.96 100.29
L2_013_245G1_scaffold_19253
Species: Firmicutes bacterium CAG:270 (50%)
2 1026 bp 37.91 5.41 100.29
L2_013_245G1_scaffold_13056
Species: Lachnospiraceae bacterium TWA4 (50%)
2 1373 bp 57.32 5.90 100.29
L2_013_245G1_scaffold_5498
Species: Mahella australiensis (50%)
4 2752 bp 51.38 5.01 100.29
L2_013_245G1_scaffold_5477
Species: Anaerostipes caccae (100%)
2 2764 bp 48.19 6.89 100.29
L2_013_245G1_scaffold_7687
Species: Coprococcus comes (50%)
2 2073 bp 48.96 4.34 100.29
L2_013_245G1_scaffold_18930
Species: Bacillus sp. B-jedd (50%)
2 1038 bp 37.09 3.18 100.29
L2_013_245G1_scaffold_4740
Species: Butyricicoccus pullicaecorum (66.67%)
3 3132 bp 52.65 6.42 100.29
L2_013_245G1_scaffold_18726
Species: Firmicutes bacterium CAG:102 (50%)
2 1047 bp 55.78 5.44 100.29
L2_013_245G1_scaffold_12606
Species: Ruminococcaceae bacterium 585-1 (50%)
2 1412 bp 56.37 4.89 100.28
L2_013_245G1_scaffold_12573
Species: Clostridium sp. CAG:75 (100%)
2 1415 bp 36.04 7.21 100.28
L2_013_245G1_scaffold_18352
Species: [Clostridium] innocuum (50%)
2 1062 bp 31.73 4.94 100.28
Displaying items 601-650 of 19835 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.