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L2_013_245G1_public_UNK

In projects: L2_013_245G1_public

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 57.95 Longest contig: 538.61 Kbp Bin length: 89.30 Mbp GC content: 48.07 %
Contigs count: 19835 Features count: 98731 rRNAs count: 18 tRNAs count: 1481

Genome completeness

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 16
Displaying items 401-450 of 19835 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L2_013_245G1_scaffold_11727
Species: Bacillus weihenstephanensis (100%)
2 1488 bp 37.70 4.64 100.81
L2_013_245G1_scaffold_14754
Species: Lachnospiraceae bacterium 3_1_57FAA_CT1 (50%)
2 1253 bp 53.63 3.35 100.80
L2_013_245G1_scaffold_12973
Species: Firmicutes bacterium CAG:424 (100%)
2 1381 bp 44.82 3.26 100.80
L2_013_245G1_scaffold_14712
Species: Erysipelotrichaceae bacterium 5_2_54FAA (100%)
2 1256 bp 37.50 4.90 100.80
L2_013_245G1_scaffold_16720
Species: Lachnospiraceae bacterium CAG:364 (100%)
2 1140 bp 40.26 3.16 100.79
L2_013_245G1_scaffold_8499
Species: Veillonella sp. oral taxon 158 (100%)
3 1908 bp 38.21 6.21 100.79
L2_013_245G1_scaffold_14456
Species: Anaerostipes caccae (100%)
2 1274 bp 44.74 7.18 100.79
L2_013_245G1_scaffold_9170
Species: Clostridium sp. MSTE9 (66.67%)
3 1798 bp 54.06 4.67 100.78
L2_013_245G1_scaffold_5890
Species: Coprococcus comes CAG:19 (66.67%)
3 2587 bp 49.59 5.04 100.77
L2_013_245G1_scaffold_18991
Species: Pseudoflavonifractor capillosus (50%)
2 1036 bp 55.60 3.47 100.77
L2_013_245G1_scaffold_18898
Species: Clostridiales bacterium 1_7_47FAA (100%)
2 1039 bp 52.84 3.46 100.77
L2_013_245G1_scaffold_9916
Species: Phascolarctobacterium succinatutens (50%)
2 1694 bp 38.31 6.91 100.77
L2_013_245G1_scaffold_16078
Species: Clostridium sp. ASF356 (50%)
2 1176 bp 45.75 3.57 100.76
L2_013_245G1_scaffold_13954
Species: Clostridium sp. ASF356 (50%)
2 1307 bp 38.18 4.13 100.76
L2_013_245G1_scaffold_7517
Species: Anaerostipes sp. CAG:276 (66.67%)
3 2108 bp 47.01 6.19 100.76
L2_013_245G1_scaffold_18558
Species: Butyrivibrio fibrisolvens (50%)
2 1054 bp 46.20 2.85 100.76
L2_013_245G1_scaffold_7488
Genus: Erysipelatoclostridium (50%)
4 2114 bp 32.02 5.46 100.76
L2_013_245G1_scaffold_18259
Species: human gut metagenome (50%)
2 1066 bp 34.05 4.22 100.75
L2_013_245G1_scaffold_18180
Species: Clostridium sp. FS41 (50%)
2 1069 bp 56.59 4.91 100.75
L2_013_245G1_scaffold_15569
Species: Lachnospiraceae bacterium CAG:364 (50%)
2 1203 bp 38.90 4.86 100.75
L2_013_245G1_scaffold_15425
Species: Coprococcus eutactus (50%)
2 1212 bp 59.65 8.29 100.74
L2_013_245G1_scaffold_15380
Species: Lachnospiraceae bacterium 3_1_57FAA_CT1 (100%)
2 1215 bp 57.61 3.83 100.74
L2_013_245G1_scaffold_17769
Species: Tyzzerella nexilis (50%)
2 1087 bp 37.81 8.14 100.74
L2_013_245G1_scaffold_15183
Species: Haemophilus parainfluenzae (66.67%)
3 1227 bp 36.27 5.01 100.73
L2_013_245G1_scaffold_6259
Species: Clostridiales bacterium 1_7_47FAA (100%)
4 2463 bp 54.00 5.42 100.73
L2_013_245G1_scaffold_1712
Order: Clostridiales (50%)
10 8944 bp 61.48 9.78 100.73
L2_013_245G1_scaffold_10237
Species: Firmicutes bacterium CAG:822 (50%)
2 1656 bp 32.97 4.71 100.73
L2_013_245G1_scaffold_11340
Species: Clostridiales bacterium 1_7_47FAA (100%)
3 1528 bp 50.98 5.10 100.72
L2_013_245G1_scaffold_17148
Species: Peptoclostridium difficile (50%)
2 1117 bp 35.54 5.37 100.72
L2_013_245G1_scaffold_8168
Species: Erysipelotrichaceae bacterium 5_2_54FAA (100%)
2 1972 bp 33.57 5.17 100.71
L2_013_245G1_scaffold_16913
Species: Dorea formicigenerans (50%)
2 1129 bp 31.98 6.24 100.71
L2_013_245G1_scaffold_7465
Genus: Clostridium (66.67%)
3 2118 bp 40.89 7.01 100.71
L2_013_245G1_scaffold_5648
Species: Roseburia hominis (50%)
2 2687 bp 56.38 7.70 100.71
L2_013_245G1_scaffold_14244
Order: Clostridiales (50%)
4 1287 bp 58.43 3.50 100.70
L2_013_245G1_scaffold_16490
Species: Olsenella profusa (50%)
2 1153 bp 29.14 6.24 100.69
L2_013_245G1_scaffold_9598
Species: Clostridium sp. HGF2 (50%)
2 1734 bp 46.71 4.67 100.69
L2_013_245G1_scaffold_4258
Order: Clostridiales (50%)
4 3468 bp 47.66 5.88 100.69
L2_013_245G1_scaffold_7845
Species: Erysipelotrichaceae bacterium 6_1_45 (80%)
5 2038 bp 44.16 5.30 100.69
L2_013_245G1_scaffold_12075
Species: Anaerostipes hadrus (50%)
4 1457 bp 41.39 43.45 100.69
L2_013_245G1_scaffold_12082
Order: Clostridiales (100%)
4 1457 bp 41.80 47.56 100.69
L2_013_245G1_scaffold_12045
Species: Erysipelotrichaceae bacterium 3_1_53 (50%)
2 1460 bp 35.48 4.73 100.69
L2_013_245G1_scaffold_10654
Species: Flavonifractor plautii (66.67%)
3 1606 bp 64.32 9.90 100.69
L2_013_245G1_scaffold_13817
Species: Clostridium sp. ATCC BAA-442 (50%)
2 1317 bp 61.73 4.33 100.68
L2_013_245G1_scaffold_16169
Species: [Clostridium] spiroforme (100%)
2 1171 bp 26.22 3.33 100.68
L2_013_245G1_scaffold_13772
Species: Clostridium sp. CAG:242 (66.67%)
3 1320 bp 45.08 2.73 100.68
L2_013_245G1_scaffold_16120
Species: Erysipelotrichaceae bacterium CAG:64 (50%)
2 1174 bp 37.31 4.09 100.68
L2_013_245G1_scaffold_10559
Species: Intestinibacter bartlettii (66.67%)
3 1618 bp 31.52 5.75 100.68
L2_013_245G1_scaffold_7084
Species: Erysipelotrichaceae bacterium CAG:64 (100%)
7 2214 bp 39.61 3.59 100.68
L2_013_245G1_scaffold_15926
Species: Firmicutes bacterium CAG:646 (50%)
2 1183 bp 45.90 4.31 100.68
L2_013_245G1_scaffold_7577
Species: Clostridium sp. CAG:1013 (50%)
2 2095 bp 54.32 4.73 100.67
Displaying items 401-450 of 19835 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.