ggKbase home page

L2_019_000G1_scaffold_123_33

Organism: L2_019_000G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 16
Location: comp(36131..36880)

Top 3 Functional Annotations

Value Algorithm Source
CRISPR system CASCADE complex protein CasD n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XT64_9BIFI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 212.0
  • Bit_score: 438
  • Evalue 4.50e-120
CRISPR-associated protein {ECO:0000313|EMBL:BAR02250.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 249.0
  • Bit_score: 509
  • Evalue 2.20e-141
CRISPR-associated protein Cas5 similarity KEGG
DB: KEGG
  • Identity: 79.1
  • Coverage: 249.0
  • Bit_score: 411
  • Evalue 1.30e-112

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium catenulatum → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGAGCGTTCTGTTATTGCAATTGGCCGGCCCATTGCAGTCATGGGGCGATTCTTCGCGATTCGTTCGGCGCGAGACTCGTAGCGAACCAACCAAAAGCGGTGTGATTGGCATGCTAGCTTCGGCGCAAGGGCGTACCCGGGAGGATCCCATAGAGGATTTGCTAGGCATATCGTTTGGTGTGCGTGTGGAGCAACGTGGCAGGGTAATCCGTGATTTGCAGACCGAAAAATCCTTGACAAGGAAACGTAACTCCAGAAAGTTCGACAAGGAGATGCCGCTGACTTATCGGTATTATCTGGCTGATGCTTGTTTTCTGGTCGCGCTCGGTGCCGATCGTTCAGTTCTGGAAATGTTGGATGAGGCGATTCATTCGCCGAAATGGCCGTTGTATCTAGGTCGACGTTCGTGCCCGCCGAATTATCCGCTGTCGTTGGGCATCCATGATGAGTATGAGGATATTCGTCAGGCTCTGAATTCCGAGACGTGGCACGCTTCGGAATGGTATCGGAGGCGTTACAGGTACCCGGATCTGGAAATTGTCTGTGACGCGGAGAAAGGCGAAAACATAACGACGCAATCTGACTTGCCGTTAAGCTTCAGCCGAGAAGGCCGGCGTTATGCGAATCGTGCGGTGCACCGTTACCGCATTCCTAACCCTGATAAGCCCGTGGAAAAAGGCGCAAAGGATAGTATACGACCTCCTTCCTTTGAATCTACCGGTGAATCGGATCCGATGAATTTCATCTAG
PROTEIN sequence
Length: 250
MSVLLLQLAGPLQSWGDSSRFVRRETRSEPTKSGVIGMLASAQGRTREDPIEDLLGISFGVRVEQRGRVIRDLQTEKSLTRKRNSRKFDKEMPLTYRYYLADACFLVALGADRSVLEMLDEAIHSPKWPLYLGRRSCPPNYPLSLGIHDEYEDIRQALNSETWHASEWYRRRYRYPDLEIVCDAEKGENITTQSDLPLSFSREGRRYANRAVHRYRIPNPDKPVEKGAKDSIRPPSFESTGESDPMNFI*