ggKbase home page

L2_019_000G1_scaffold_81_5

Organism: L2_019_000G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 16
Location: comp(6449..7147)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D609A1 related cluster n=1 Tax=unknown RepID=UPI0003D609A1 similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 232.0
  • Bit_score: 450
  • Evalue 8.20e-124
ECF-family sigma factor H {ECO:0000313|EMBL:ETI83055.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 232.0
  • Bit_score: 450
  • Evalue 1.20e-123
sigH; ECF-family sigma factor H similarity KEGG
DB: KEGG
  • Identity: 60.1
  • Coverage: 183.0
  • Bit_score: 228
  • Evalue 1.40e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Varibaculum cambriense → Varibaculum → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGGAAACTGAAATCCTAGAGGCAGAGCGGGCAGGCACGGCGGCGCCCCCTAAAACGGTAGCGCTTGAGCGCGGGCATAGGCCTGCCGGCGAGGACGGGAACGGATCTGTGTCGGATCCCTTAGCTACCGGTGATAATAATGTGCGCCTTTCGGACCGTTTCAGCAAAGAAGCCCTACCGTTACTAGATCAACTTTATGCAGGAGCGCTGCGACTTACTCGTAAACCTACAGATGCGGAAGACCTGGTTCAAGAGACCTATATGCAGGCTTTTCGTAAGTTTAACCAGTACCAACCAGGTACCAATCTCAAAGCCTGGATGTACCGGATTATGACTAATACCTTTATAAACCAGTACCGTTTAAAAACCCGGCGTCCCCAAGAACAAGGATCTGGAGAAATAACTGATCAAGCCCAGGTAGCGCAATCACTGCATCATGGAGAGGGAATGCCCTCTGCCGAGACTACCGCTTTGGAACGCCTTCCGAATGAAACTATCCAGGCTGCCTTTGAAAAACTTTCGGATGAGCATCGAGCGGTAGTATACCTGGCGGATGTGGAACAGTTCAGCTATAAGGAAATATCGCAGATTCTGGGAATCCCCCTAGGTACTGTAATGTCTAGGCTTCATCGAGGGCGCAGCCAACTTAGAGAGGAACTATCAGAATATGCCCGCGAGTACGGAATCGGGGTGAAGTAA
PROTEIN sequence
Length: 233
METEILEAERAGTAAPPKTVALERGHRPAGEDGNGSVSDPLATGDNNVRLSDRFSKEALPLLDQLYAGALRLTRKPTDAEDLVQETYMQAFRKFNQYQPGTNLKAWMYRIMTNTFINQYRLKTRRPQEQGSGEITDQAQVAQSLHHGEGMPSAETTALERLPNETIQAAFEKLSDEHRAVVYLADVEQFSYKEISQILGIPLGTVMSRLHRGRSQLREELSEYAREYGIGVK*