ggKbase home page

L2_019_000M1_scaffold_165_16

Organism: L2_019_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 16
Location: comp(14649..15248)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UNI5_AKKM8 similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 199.0
  • Bit_score: 399
  • Evalue 1.10e-108
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 199.0
  • Bit_score: 399
  • Evalue 3.10e-109
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACD04297.1}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 199.0
  • Bit_score: 399
  • Evalue 1.50e-108

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Akkermansia muciniphila → Akkermansia → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 600
ATGTCGGGCCCCATTGATTATACGACCCTGGAAGACACTGAACTGGTCGCCAGAGCTCGGGAAGGAGATTCCCGTGCTTTTGACGAGCTGGTGATCCGCCACAGCCGTAAGCTCCATGCCACGCTGTACCAAATGACGGACAACTACGACGATGCCTATGACATCGCCCAAGAAGCGTTTTCCAAAGCCTACAGGGCCTTGCGCTACTTCAACGGTCAAAGCGCATTTTACACATGGCTTCACTCCATTGCCGTCAACCATGCCAGGAACTTCCTGAAAAAGCGCAACCGCAGAATGACCTACAGCCTGGACGACGACGAATACGGCGACCATACGGAAAAGGACATGAACATGGCGGATGAAACGGACGGGGCGGATCCCGAACGCCGCACTCATTTAAACGAACTTCAGCTCAAGATCAACGAAGCGCTCAAAAAGCTCTCCACAAAACACCGTGAAGTTGTGGTTCTGCACGATGTCAAAGGGCTTAATCATACGGAGATTTCCGCCCTTCTCGGCATCTCGGAAGGAACGCTCAGATCCCGATTGCATTATGCCCACAAGGAACTCCAGGGATTGCTGGCGGAATATCTTAGCTAA
PROTEIN sequence
Length: 200
MSGPIDYTTLEDTELVARAREGDSRAFDELVIRHSRKLHATLYQMTDNYDDAYDIAQEAFSKAYRALRYFNGQSAFYTWLHSIAVNHARNFLKKRNRRMTYSLDDDEYGDHTEKDMNMADETDGADPERRTHLNELQLKINEALKKLSTKHREVVVLHDVKGLNHTEISALLGISEGTLRSRLHYAHKELQGLLAEYLS*