ggKbase home page

L2_019_000M1_scaffold_52_27

Organism: L2_019_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 16
Location: comp(29107..30333)

Top 3 Functional Annotations

Value Algorithm Source
ROK family protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BQ25_9BIFI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 408.0
  • Bit_score: 795
  • Evalue 1.40e-227
Putative xylose repressor {ECO:0000313|EMBL:BAR03154.1}; ROK family protein {ECO:0000313|EMBL:EEG71588.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 408.0
  • Bit_score: 795
  • Evalue 2.00e-227
NagC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 95.3
  • Coverage: 408.0
  • Bit_score: 770
  • Evalue 2.30e-220

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium pseudocatenulatum → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1227
ATGGCTTCACTGCGGAGTATCAATCAAGACGATTTGCGAAACCATAATCTTTCCGTGGTGCTCGACTCGCTGTTGCGTGCCACCGAACCAATGAGTCGCGCCGATCTTGCCAAGAAAACCGGATTGACCAAAGCGGCCATGTCGGTATTGGTGTCGTTGATGCTCGACAATGAGATTCTGGTGGAAGGCGCGCCTTCCGGCCAATCGCTGTATGGGCGCCCCAGCATTCCGCTTGAAATCAAAGGTGGACGCCTGTGCGGCATGGGATTGCAGGCCAACACCGACGGTTATGGCGTGGTGGTGCTCGATCTTGACGGTTCCGTTGTGGGGGAGCAGTGGGTCGACGCCGACATGGCCAACGCCGACGAGCGGGCGATTTTCGCCCGTCTCGACGAACTGGCTTTGCAGCAGGAAGAAGCGCTTGCCAAGAAAGGTTATGTGCTTGCCGGTACCGGTTTGGCATTGCCGGGTCTCGTCACCGATGATATGCGATTGCTTGGCGCGCGCAATCTCGGTTGGGAACGTTTGGATCTCAAGCAGTTCGATGTGGTCAAGCGACTTGATCCTGTTGCCTGCAACGAGGCCAATGCCGCCGCGTTGGCACAGGTTCCCGGCTATGCCACGCAGCGTAAGGATTCTGGGCGGATCAAGCCGACGGATTCGTTTCTTTACATGTCGACCGACGTGGGTATCGGCGGTGCAGTGATCCGCGAAGGGCGTGTGGTGAGCGGTGATCACGGTTTCGGTGGCGAATTGGGCCATGTTTCCGTCGACATGCGCGGTCCCGTCTGCCGTTGCGGCCGGCGCGGCTGCCTTGAAGTGTATGCGGGCAGGCGTTCCATGGTGAGCGCGGCCGGAATCGCCAGCAGCGATGCCGCCGCGACCCGCAGCGCCATCGACGAATTGATCGACCGCTGGCACCAGCGCGATGCGCAGACCGTGGCCGTTGTGGAAAAAGCATTGGAGGCCATGGCTTCCGTAATCGCATCGACCATCAATGTCTGTGACGTCGACGTGGTGATGCTCGGCGGCTTGTGGGCGCGTTTCGAACCTGAACTGATTCGCAGAATCGAACGCATGGTACGCCCGCAAGTGCTGGCGTATCCGGAAGTCGAGGCAAGCGTGCTTGTGGCGGATATCGTCGATCGTCCGGCCTTGATGGGCGCTGCGGAAATCGGTTTGCGACGCTTTATCGACAATCCGCTGCGTTTCATGAAGCAAAACTAG
PROTEIN sequence
Length: 409
MASLRSINQDDLRNHNLSVVLDSLLRATEPMSRADLAKKTGLTKAAMSVLVSLMLDNEILVEGAPSGQSLYGRPSIPLEIKGGRLCGMGLQANTDGYGVVVLDLDGSVVGEQWVDADMANADERAIFARLDELALQQEEALAKKGYVLAGTGLALPGLVTDDMRLLGARNLGWERLDLKQFDVVKRLDPVACNEANAAALAQVPGYATQRKDSGRIKPTDSFLYMSTDVGIGGAVIREGRVVSGDHGFGGELGHVSVDMRGPVCRCGRRGCLEVYAGRRSMVSAAGIASSDAAATRSAIDELIDRWHQRDAQTVAVVEKALEAMASVIASTINVCDVDVVMLGGLWARFEPELIRRIERMVRPQVLAYPEVEASVLVADIVDRPALMGAAEIGLRRFIDNPLRFMKQN*