ggKbase home page

L2_022_000G1_scaffold_48_26

Organism: L2_022_000G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 16
Location: comp(17964..18677)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMJ2_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 91.1
  • Coverage: 237.0
  • Bit_score: 420
  • Evalue 9.30e-115
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.1
  • Coverage: 237.0
  • Bit_score: 420
  • Evalue 1.30e-114
RNA polymerase, sigma 29 subunit, SigE similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 233.0
  • Bit_score: 394
  • Evalue 1.20e-107

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Faecalibacterium prausnitzii → Faecalibacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 714
ATGTTCCATGGTATTTCTGCATTCCGGCTGTTCTGGCAGCGGCTCCTTGCACGGCTGCGATACTGCGGCGGTGCCCATTATCTGGCGGGCGCGCCCAGTCTGCCGCCGCCCCTGACCCCGGAGCAGGAAAAAGCCCTGCTGGCCCGCATGGCAGAGGGAGACGCCTGCGCCCGGGACGACCTGATCACTCACAACCTGCGGCTGGTGGTGTACCTTGCCAAAAAGTACGAAAACAGCGGGGTCCCCGCCGAGGATATGATCAGCATTGGCACCATCGGGCTCATCAAGGCCGTGAACACCTTCACCCCGGAGCGCAGCATCAAGCTGGCCACCTACGCCAGCCGCTGCATCGGCAACGAGATCCTGATGTACTTACGCAAAAGCTCCAACCGTCGGCAGGAGGCCAGCATCGACGAGCCGCTCAATGTGGACGGCGACGGCAACGAGCTGCTGCTCTCGGACATTCTTGGCAGCGACGAGGACCAGATCAGCCAGCGGCTGGAACAAGACGCCGAGCGTGCCATTCTGCGCCGTGCCGTGGACAGCCTGTCCCCACGGGAGCGGCAGATCATGGAGCTGCGCTTCGGCCTTGCCGACGGCGTGGAGCGCACCCAGAAGGAAGCCGCCGACGCCCTTGGCATCAGCCAGAGCTATATCTCCCGGCTGGAAAAGCGGATCATCCATACATTAAAGGCCCAGCTGGAAAGCGAATGA
PROTEIN sequence
Length: 238
MFHGISAFRLFWQRLLARLRYCGGAHYLAGAPSLPPPLTPEQEKALLARMAEGDACARDDLITHNLRLVVYLAKKYENSGVPAEDMISIGTIGLIKAVNTFTPERSIKLATYASRCIGNEILMYLRKSSNRRQEASIDEPLNVDGDGNELLLSDILGSDEDQISQRLEQDAERAILRRAVDSLSPRERQIMELRFGLADGVERTQKEAADALGISQSYISRLEKRIIHTLKAQLESE*