ggKbase home page

L2_022_000G1_scaffold_15762_2

Organism: L2_022_000G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 16
Location: comp(616..1035)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70, region 4 n=77 Tax=Firmicutes RepID=C0EE66_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 139.0
  • Bit_score: 284
  • Evalue 3.60e-74
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EOI44396.1}; TaxID=1158636 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 139.0
  • Bit_score: 284
  • Evalue 5.00e-74
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 138.0
  • Bit_score: 209
  • Evalue 3.20e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Enterococcus faecium → Enterococcus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 420
ATGAAACCGTCTGACTTCCAAAAAACAATTCAGTGTCAGTTTGAATGTAAGCTGAAAAAAGTTGTCAAAGGTATTATCTGGAACTACCGTAAAGAATTAAAACGAAGAAAAAACAAGGAAATATCTTTTAGCGAATTACCAGACATTACGGTAGAAAGTCTGGCAACATGGGACGACTACGAAACAAACTACACAATTTTTAATGTGTGTGGCATAGATATTAAAGTCCTTGATGATGAACTTGCAGAAGCTCTCAAACAGCTACCCGAAAAAAAACGTAACAATGTATTGATGTATTACTTCTTGGAAATGAGTGATACAGAGATTGCAGATATTATGAATTATACCAGAGGGGCTGTGTTCAAACACAGACACCGTGCACTAGAAACTATGAAAGAGATACTAAAGGAGAAGAAATAG
PROTEIN sequence
Length: 140
MKPSDFQKTIQCQFECKLKKVVKGIIWNYRKELKRRKNKEISFSELPDITVESLATWDDYETNYTIFNVCGIDIKVLDDELAEALKQLPEKKRNNVLMYYFLEMSDTEIADIMNYTRGAVFKHRHRALETMKEILKEKK*