ggKbase home page

L2_022_000G1_scaffold_19_25

Organism: dasL2_022_000G1_concoct_10_fa

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(24100..24630)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 176.0
  • Bit_score: 353
  • Evalue 1.10e-94
defB; formylmethionine deformylase (EC:3.5.1.88) similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 172.0
  • Bit_score: 142
  • Evalue 7.90e-32
Peptide deformylase n=1 Tax=Clostridium sp. CAG:354 RepID=R7FAA6_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 176.0
  • Bit_score: 353
  • Evalue 8.00e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. CAG:354 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 531
ATGGGAAAAATAATAAAAGTAAGAGAAGTAGGAGATCCAGTACTTAATAAAATGTCAAAAGAAGTTGATATAACAAATATAAATAGTGATGTTTTAGATATTATAGATGATTTAAAAGCAACTCTCGAAGATGGGGTGGGAGTTGGTATTGCTGCACCACAGATTGGTATTAACAAAAGAATTATAGTAGTTGAAGCAAAAAAAGAAAATGTAAGATATAATGATGCAGAAGATATACCATTAACTGCTATGATAAATCCAAAATGGGAGAAACTATCAGATGAAACTGATGTACAATTTGAAGCTTGTTTAAGTGTACCTGCAATAGCTGGTAAAGTTGAAAGATTTAAACATATCACCTTACAATATTACAATGAACAAGGAGAAAAGATAGAAAAGGAGATTCATGGATTTTTTGCTAGGCTTATTCAGCACGAATGTGACCACTTAGATGGATTTACACTATTAAATAGAGTTAGAGAAAAAGATGGTTTTGCAACAAAAGAAAATAGGAAGAAATATAATTTATAA
PROTEIN sequence
Length: 177
MGKIIKVREVGDPVLNKMSKEVDITNINSDVLDIIDDLKATLEDGVGVGIAAPQIGINKRIIVVEAKKENVRYNDAEDIPLTAMINPKWEKLSDETDVQFEACLSVPAIAGKVERFKHITLQYYNEQGEKIEKEIHGFFARLIQHECDHLDGFTLLNRVREKDGFATKENRKKYNL*