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L2_022_000M1_scaffold_4930_1

Organism: L2_022_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 15
Location: comp(2..550)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.6
  • Coverage: 180.0
  • Bit_score: 231
  • Evalue 5.10e-58
Pseudouridylate synthases, 23S RNA-specific (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 180.0
  • Bit_score: 171
  • Evalue 1.60e-40
Pseudouridine synthase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PM58_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 60.6
  • Coverage: 180.0
  • Bit_score: 231
  • Evalue 3.60e-58

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Taxonomy

Subdoligranulum variabile → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 549
ATGCAGATGCTGCATTTCCGCGTGCCCACATCCTGCAATGGCATGCGCCTGAATATTTTTCTACGCACCATGGGTGTCAGCTCCGCCTGCATCAAGGCGGTCAAATATCAGGGCACCGGCTTCTGTGTGCGGCTGGGGGATGAGGTCATCCCCGTCCATACAGATTACCGCGTTGCAACAGCGCAGATTGTTTCGTTCGCTCTGCCTCCTGAGCCTCCCACCGCTGTTCAGCCGGAGCCGCTGCCTATTGATGTTATCTATGAGGATGAGTTTGCGGCTGTATTGAACAAACCTGCCGGCATTGCGGTACACCCCACATTAAACCATACCAGCGGAACCCTTGCGAATGGCTGGCTGTACCGCCTGAAATGCCGCGGCGAGGATGGCGTATTCCGCCCGGTCAACCGCATTGATAAAAACACCAGCGGCCTTGTGCTGTGTGCGCAGAATGCCTTTGCCGCGCCGGAACTCGCCAAGACTGCACAAAAGTGTTATCTTGCCCTGGTGGAAGGCCCGCTGCCCGTTGGGTCGGGCCGCATTGACGTCCCG
PROTEIN sequence
Length: 183
MQMLHFRVPTSCNGMRLNIFLRTMGVSSACIKAVKYQGTGFCVRLGDEVIPVHTDYRVATAQIVSFALPPEPPTAVQPEPLPIDVIYEDEFAAVLNKPAGIAVHPTLNHTSGTLANGWLYRLKCRGEDGVFRPVNRIDKNTSGLVLCAQNAFAAPELAKTAQKCYLALVEGPLPVGSGRIDVP