ggKbase home page

L2_022_000M1_scaffold_4516_1

Organism: L2_022_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 15
Location: 1054..2259

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 402.0
  • Bit_score: 788
  • Evalue 2.40e-225
Isopropylmalate/homocitrate/citramalate synthases (EC:2.3.3.13) similarity KEGG
DB: KEGG
  • Identity: 85.1
  • Coverage: 403.0
  • Bit_score: 715
  • Evalue 5.20e-204
2-isopropylmalate synthase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMT1_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 402.0
  • Bit_score: 788
  • Evalue 1.70e-225

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Subdoligranulum variabile → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1206
ATGATGGACGCAACAAAGTATCATGTAGGTTATTATCCCCCGCCGGTTGAGCCCGGCCATGTCTATGAATGGCCCCAGAAAGACCATATCGAAAAGGCTCCCGCCTGGTGCAGCGTAGACCTGCGCGATGGCAACCAGAGCTTGATCGTTCCCATGAATCTGGAAGAAAAGCTTGAATTTTATGATATGCTCATCAGGATCGGCTTTAAGGAGATTGAGGTCGGCTTCCCGGCTGCGTCCGAGACCGAGTACGACTTTCTGCGCGCCTTGATCGATGGCAACCGCATCCCGAACGATGTCACCGTTCAGGTGCTGACCCAGTGCCGTGACCATATCATCCGTAAAACATTTGAGGCCGTTAAGGGTGCGCCGCGCGCCATCATCCACTTTTATAACTCCACCAGCGTTGCCCAGCGCGAGCAGGTGTTCAAAAAGAGCAAGGAAGAGATCAAGCAAATCGCTGTTGACGGCGCAAAGCTGGTTAAAAAGCTGAGCGAAGAATACGAGGGCAACTTCCTGTTTGAATACAGCCACGAAAGCTTTACCGGCACCGAGCCGGAATACGCCGTTGAGGTTTGCAACGCCGTATTGGATGTGATGCAGCCCACCCCGGACCGCCCGATGATCATCAATCTGCCGGTCACGGTGGAAATGAGCATGCCGCACATTTACGCCAACCAGATTGAATGGTGCTCCAAGCACCTCAAGTACCGCGACAGAGTGATCCTGTCCACCCACCCCCACAACGACCGCGGCTGCGGCGTGGCAGATGCCGAGCTGGCTGTTCTGGCCGGTGCCCAGCGCATTGAATGCTGCCTGTTCGGCAACGGCGAGCGCACCGGCAACGTGGATGCCATCACCCTGGCCATGAATATGTACAGCCACGGCGTGGACCCGCACCTCGACTTCAGCAACATGCCGGCCATCTGCGAAACGTATGAACGCGTGACCCGCATGCATGTGTACGAGCGCAGCCCGTATGCCGGTTCCCTGGTGTTTGCTGCGTTCAGCGGCAGCCACCAGGACGCCATTGCCAAGGGCATGACCTGGCGCAAGGAGCATAACCTGCACGAGTGGACCTGCCCGTACATTCCCATTGACCCGCATGACATTGGCCGCACTTACGATGCTGACGTCATCCGCATCAACAGCCAGAGCGGCAAGGGCGGTATCGGCTTCCTGCTGCAGCAGAACTACGGCTACAAT
PROTEIN sequence
Length: 402
MMDATKYHVGYYPPPVEPGHVYEWPQKDHIEKAPAWCSVDLRDGNQSLIVPMNLEEKLEFYDMLIRIGFKEIEVGFPAASETEYDFLRALIDGNRIPNDVTVQVLTQCRDHIIRKTFEAVKGAPRAIIHFYNSTSVAQREQVFKKSKEEIKQIAVDGAKLVKKLSEEYEGNFLFEYSHESFTGTEPEYAVEVCNAVLDVMQPTPDRPMIINLPVTVEMSMPHIYANQIEWCSKHLKYRDRVILSTHPHNDRGCGVADAELAVLAGAQRIECCLFGNGERTGNVDAITLAMNMYSHGVDPHLDFSNMPAICETYERVTRMHVYERSPYAGSLVFAAFSGSHQDAIAKGMTWRKEHNLHEWTCPYIPIDPHDIGRTYDADVIRINSQSGKGGIGFLLQQNYGYN