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L2_022_000M1_public_UNK

In projects: L2_022_000M1_public

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 51.98 Longest contig: 506.74 Kbp Bin length: 82.39 Mbp GC content: 46.80 %
Contigs count: 13677 Features count: 81750 rRNAs count: 15 tRNAs count: 1007

Genome completeness

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 15
Displaying items 351-400 of 13677 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L2_022_000M1_scaffold_12748
Species: Oscillibacter sp. 1-3 (50%)
2 1049 bp 62.44 4.29 100.38
L2_022_000M1_scaffold_7101
Species: Ruminococcus sp. CAG:563 (50%)
2 1587 bp 54.00 3.02 100.38
L2_022_000M1_scaffold_7072
Species: Ruminococcus torques CAG:61 (100%)
2 1590 bp 42.01 7.36 100.38
L2_022_000M1_scaffold_3010
Genus: Butyrivibrio (66.67%)
3 3216 bp 45.77 5.27 100.37
L2_022_000M1_scaffold_6953
Species: Ruminococcus torques CAG:61 (100%)
3 1608 bp 39.68 4.01 100.37
L2_022_000M1_scaffold_5590
Species: Lachnospiraceae bacterium 7_1_58FAA (100%)
4 1898 bp 60.96 3.79 100.37
L2_022_000M1_scaffold_12070
Species: Blautia obeum (100%)
2 1088 bp 44.85 3.03 100.37
L2_022_000M1_scaffold_12018
Species: Desulfovibrio vulgaris (50%)
2 1091 bp 65.26 3.02 100.37
L2_022_000M1_scaffold_11877
Species: [Ruminococcus] gnavus (100%)
2 1100 bp 46.91 2.73 100.36
L2_022_000M1_scaffold_11879 2 1100 bp 40.91 5.18 100.36
L2_022_000M1_scaffold_8676
Species: Ruminococcus lactaris (50%)
2 1375 bp 53.89 6.11 100.36
L2_022_000M1_scaffold_11531
Species: Erysipelotrichaceae bacterium 2_2_44A (50%)
2 1124 bp 40.04 3.34 100.36
L2_022_000M1_scaffold_11444
Species: Ruminococcus torques CAG:61 (100%)
2 1130 bp 38.85 5.84 100.35
L2_022_000M1_scaffold_6469
Phylum: Firmicutes (66.67%)
3 1695 bp 48.20 5.40 100.35
L2_022_000M1_scaffold_8342
Species: Clostridium sp. SS2/1 (50%)
2 1414 bp 38.76 3.61 100.35
L2_022_000M1_scaffold_6387
Species: Ruminococcus torques CAG:61 (66.67%)
3 1710 bp 44.62 4.74 100.35
L2_022_000M1_scaffold_10955
Species: Bacteroides uniformis (50%)
2 1163 bp 34.74 60.88 100.34
L2_022_000M1_scaffold_6175
Species: Clostridium sp. CAG:678 (50%)
2 1752 bp 55.59 5.14 100.34
L2_022_000M1_scaffold_10601
Species: human gut metagenome (50%)
2 1190 bp 44.62 3.78 100.34
L2_022_000M1_scaffold_7754
Species: Clostridium sp. CAG:62 (50%)
2 1489 bp 52.05 4.73 100.34
L2_022_000M1_scaffold_10579
Species: Ruminococcus sp. SR1/5 (50%)
2 1193 bp 42.92 8.55 100.34
L2_022_000M1_scaffold_7708
Species: Bilophila wadsworthia (66.67%)
3 1495 bp 67.22 3.71 100.33
L2_022_000M1_scaffold_10285
Species: Bilophila sp. 4_1_30 (50%)
2 1220 bp 61.56 3.93 100.33
L2_022_000M1_scaffold_10208
Species: human gut metagenome (100%)
2 1226 bp 55.79 8.32 100.33
L2_022_000M1_scaffold_7450
Species: Clostridium sp. CAG:217 (50%)
2 1534 bp 42.76 4.69 100.33
L2_022_000M1_scaffold_5784
Species: Clostridium sp. BL8 (100%)
2 1848 bp 50.92 3.25 100.33
L2_022_000M1_scaffold_7372
Species: Ruminococcus sp. SR1/5 (50%)
2 1546 bp 44.24 4.08 100.32
L2_022_000M1_scaffold_7333
Species: Ruminococcus sp. CAG:60 (100%)
2 1552 bp 46.59 4.45 100.32
L2_022_000M1_scaffold_7276
Species: Thermanaerovibrio acidaminovorans (50%)
2 1561 bp 34.98 7.59 100.32
L2_022_000M1_scaffold_7260
Species: Ruminococcus sp. CAG:90 (50%)
2 1564 bp 44.18 5.56 100.32
L2_022_000M1_scaffold_7223
Species: Butyricicoccus pullicaecorum (100%)
2 1570 bp 52.48 3.63 100.32
L2_022_000M1_scaffold_5598
Species: unidentified phage (50%)
2 1896 bp 43.99 32.67 100.32
L2_022_000M1_scaffold_9753
Species: Ruminococcus sp. CAG:90 (100%)
2 1265 bp 46.64 3.32 100.32
L2_022_000M1_scaffold_9696
Species: Bacteroides fragilis (50%)
2 1271 bp 44.85 3.54 100.32
L2_022_000M1_scaffold_7064
Species: Ruminococcus sp. SR1/5 (50%)
2 1591 bp 46.83 5.85 100.31
L2_022_000M1_scaffold_9583
Species: Coprococcus catus (50%)
2 1283 bp 42.32 2.46 100.31
L2_022_000M1_scaffold_6977
Species: Clostridium sp. ASBs410 (66.67%)
3 1606 bp 27.33 6.16 100.31
L2_022_000M1_scaffold_9420
Species: Desulfovibrio sp. FW1012B (50%)
2 1298 bp 59.63 3.70 100.31
L2_022_000M1_scaffold_5351
Species: Lachnospiraceae bacterium 8_1_57FAA (50%)
2 1965 bp 43.72 5.80 100.31
L2_022_000M1_scaffold_6673
Species: Anaerotruncus sp. G3(2012) (100%)
3 1654 bp 61.61 5.62 100.30
L2_022_000M1_scaffold_5256
Species: Ruminococcus sp. CAG:177 (80%)
5 1992 bp 56.53 5.42 100.30
L2_022_000M1_scaffold_13574
Species: Clostridium sp. CAG:352 (100%)
2 1002 bp 36.43 6.59 100.30
L2_022_000M1_scaffold_8873
Order: Clostridiales (100%)
3 1355 bp 43.17 3.32 100.30
L2_022_000M1_scaffold_13230
Species: Bacteroides sp. D2 (50%)
2 1020 bp 38.33 3.53 100.29
L2_022_000M1_scaffold_12968
Species: Clostridium sp. CAG:352 (100%)
2 1035 bp 36.52 4.49 100.29
L2_022_000M1_scaffold_4993
Species: Bilophila wadsworthia (100%)
3 2073 bp 71.44 4.63 100.29
L2_022_000M1_scaffold_8593
Species: Ruminococcus sp. CAG:9 (50%)
2 1385 bp 46.43 6.06 100.29
L2_022_000M1_scaffold_12666
Species: Ruminococcus torques CAG:61 (50%)
4 1053 bp 35.33 5.70 100.29
L2_022_000M1_scaffold_12634
Species: Firmicutes bacterium ASF500 (100%)
2 1056 bp 66.67 4.12 100.28
L2_022_000M1_scaffold_4053
Species: Firmicutes bacterium CAG:212 (66.67%)
3 2465 bp 43.12 5.96 100.28
Displaying items 351-400 of 13677 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.