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L2_022_103G1_scaffold_395_2

Organism: L2_022_103G1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: 1033..4842

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 1266.0
  • Bit_score: 2493
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=13 Tax=Bacteria RepID=RPOC_BIFLD similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 1266.0
  • Bit_score: 2493
  • Evalue 0.0
rpoC; rpoc similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 1266.0
  • Bit_score: 2493
  • Evalue 0.0

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Taxonomy

Bifidobacterium longum → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3810
GTGCTGGACGTCAACGCATTTGACAAGATTCGCATCGGCCTTGCCACCGCCGATGACATCCGTGGTTGGAGCCACGGTGAGGTCAAGAAGCCTGAAACCATCAACTACCGTACGCTGAAGCCTGAGAAGGACGGTCTGTTCGGCGAACAGATCTTCGGCCCGACCCGTGACTGGGAGTGCGCCTGCGGCAAGTACAAGCGCGTGCGTTTCAAGGGCATCGTCTGCGAGCGATGCGGTGTCGAAGTGACCCGCAGCCGCGTGCGCCGTGAGCGCATGGGCCACATCGAGCTCGCCGCCCCGGTGACGCACATCTGGTTCTTCAAGGGTGTGCCTTCCCGCCTCGGCTACCTGCTGAACGTCACCCCGAAGGATCTGGAGCGCGTGATCTACTTCGCCTCCTACATGGTCACCGAGGTGAACGAGGACGAGCGTCACAACGATCTGCCCGGCCTGCAGGACGAGTTCGATTCCGAGATCAAACGCCTTGAGCAGCGCCGTGACTCCGACATCGAAGCCCGCGCCAAGAAGGTCGAAGAGGATCTCGCCGCCCTTGAGGAGGCCGGCGAGGCCAAGGGCCCGGCCCGCACCAAGTTGCGTAACGGTGCCGAGCGTGATATGGCTGCCATCCGCACCCGCTACAACGACCAGATCGCCCGTGTGGACGCCGTCTTCGACAAGTTCAAGAAGCTCAAGCCCGGCGACATGGTCGACGACGTGGACCTGTGGCGCGAGATGCAGGACCGCTACGGCGATTACTTCGACGGCTGCATGGGCGCCGAAGCCATCAAGAAGCGCCTGCAGTCCCTCGACCTGGAGACCATCTCCAAGGAACTGCGCGAGGAGATCAAGGACGCTTCCGAACAGCGTAAGACCAAGGCCCTGAAGCGCCTCAAGGTCGTCAACGCCTTCCTGACCACCGGCAACAAGCCGGAGGCCATGGTGCTCGACGTGATCCCGGTCATCCCGCCGGACCTGCGCCCGATGGTCCAGCTCGACGGTGGCCGCTTCGCCACCTCCGACCTCAACGACCTGTACCGCCGTGTGATCAACCGTAACAACCGTCTGAAGCGACTGATCGAGCTCGGCGCCCCTGAAATCATGCTCAACAACGAGAAGCGCATGCTCCAGGAAGCCGTCGACTCCCTGTTCGACAACGGCCGTCGTGGTCGCCCGGTCACCGGTGCCTCCAACCGTCCGCTGAAGTCCCTGTCCGACATGCTCAAGGGTAAGCAGGGTCGTTTCCGTCAGAACCTGCTCGGTAAGCGAGTCGACTACTCCGGCCGTTCCGTGATCGTGGTCGGCCCGTCCCTGCGCATGCACCAGTGCGGTCTGCCGAAGCCGATGGCCCTCGAGCTGTTCAAGCCGTTCGTCATCAAGCGCCTCGTGGACCTGAACTATGCGCAGAACATGAAGTCCGCCAAGCGTCTTGTGGACCGCGGCGACGCCGAAGTGTGGGGCGTGCTCGAGGAGGTCATCTCCGAGCACCCCGTGCTGCTCAACCGTGCACCTACGCTGCACCGTCTGGGTATTCAGGCATTCGAGCCGATCCTGGTGGAAGGCAAGGCCATCCACCTGCCGCCGCTGGCCTGCGCCGCCTTCAACGCCGACTTCGATGGTGACCAGATGGCAGTCCACCTGCCGCTCTCCGCCGAAGCCCAGGCCGAGGCCCGCTCGCTGATGATGGCTTCCGACAACATCCTGAAGCCGGCCGACGGCCACACCGTGACCATGCCGAGCCAGGATATGATCCTCGGTTTGTACTACCTGTCCACCGTGCTGGAAGGCGTCAAGGGCCAGGGCCGCGTGTTCTCCTCGCTGGAAGAGGCCGAAATGGCCCTCGACCGCCACGAGATCGACATGCAGGCCAAGGTGCTCATCCGCCTGCCCGAGAGCTTCGTGCTGCCGAAGAACTGGGAGCCCGGCGAAGTCAAGGTGCTCGACCCGCGCGAAGGTGAGGATGAGGTCGTCAAGGAAGAACGCTTCCACGACGGCACCGTGCTGTTCGCCACCTCCTACGGCCGCATCCTGTTCAACGAGACCCTGCCGACCGACTACCCGTTCGTCAACGAGCAGGTGGCCAAGGGCCGTCTGTCCAAGATCGTCGATGACATCGCCATGCGTTACTCCACCCAGCAGGTGGCCGCCACGCTGGATGCCCTGAAGGATCTCGGCTTCACCCGCGCACCGTGGTCCGGCGTGTCCTTCGCGTTCTCCGACGTGAACGAGCCGCCCGAGCGCGACGAGAAGATCGCCGAGTACGAGGCCAAGGCCGACAAGGTCAACGCCAACTACGAGATGGGTCTGTTGACCGAGGAAGCTCGCCGTCAGGAACTCATCGACCTGTGGACCGAGTGCACCGCCGAGGTGTCCAAGGAAGTCGAGGAGAAGTTCGACCCGACCTCCAACCTGGCCATCATCGTGCAGTCTGGTGCACGAGGCAACATGATGCAGATCAACCAGATTGCAGGTATGCGAGGCCTCGTGGCTAACCCGAAGGGTGAGATCATTCCCCGACCGGTGAAGTCCAACTACCGCGACGGCCTGTCCGTGCTGGAGTACTTCATCTCCCAGCACGGTGCACGTAAGGGTCTGGCCGATACCGCACTGCGTACCGCAGAATCCGGTTACCTGACCCGTCGTCTGGTCGACGTCTCCCAGGACGTCATCGTGCGCGAAGAGGACTGCGGCACCAAGGCCGGTCTGCCCATCCGTGTCGCCGAGCGCGACAACGACGGCAACCTGGTGCTCGTCAAGGCCGCCGACGGTGGCCCGTACTCCCGTCTGCTCGCCGCCGACGTCATCGACCCGGCCGACGGACAGACCGTGCTGTACAAGCGCGACGACGCCCTGTCCATGGACGTGCTCAACGACCTCGTGGCCCACGGTGTCGAGGAAGTCAAGTGCCGTTCCGTGCTGACCTGCGAGTCCAAGCGCGGCGTGTGCGCCAAGTGCTACGGCTGGTCCCTGGCCACCAACAAGCTGGTCGATGTCGGCGAGACCGTCGGTATCGTCGCCGCCCAGTCCATCGGTGAGCCTGGTACCCAGCTGACGCTGCGTTCCTTCCACTCCGGTGGTGTGGCCGCGGCCTCCGATATCACCCAGGGTCTTCCCCGTGTCACCGAGCTTTTCGAGGCCCGCACCCCGAAGGGTGAGGCACCGATCACCGAGTTCGCCGGCAGCATCAAGATCGTGGAGAACGATCGCGGTCGCCAGATCATCCTGACCCCGGACGCCGATTCCGGCGCGCCGAAGGAAGACGGCGTGATCAAGCCGATCACCTACCAGGTCTCCAAGCGCGTGCCGCTCAAGGTTGCCGACGGCGACCACATCAAGGTCGGCACCCAGCTGGTCGAAGGTTCCGTGGATCCGAAGAAGATCCTCACCATCCTCGGCAAGCGCGCCGCCCAGGTCAACATCGTGGAGGAAGTGCACACCGTGTACCGCTCCCAGGGTGTGGACATCCACGACAAGCACATCGAGGTCATCGTGCACCAGATGACCCGTCGCGTGACCATCATCGACTCCGGCGACACCGACCTGCTGCCGGGTGAGCTGGTGGACAATGCCCGCTTCCGCGAGATCAACCGCAACATCGTCAAGAACGGTGGCCGTCCGGCCGTCGGTCGTCCGGCGCTCATGGGCATCACCAAGGCGTCGCTGGCCACCGACTCCTGGCTGTCCGCCGCATCCTTCCAGGAGACCACCCGCGTGCTCACCGAAGCCGCGCTCTCCGAGAAGGTCGATGACCTCAAGGGCCTCAAGGAGAACGTCATCATCGGTAAGCTCCTCCGATCAGGGCGGTCAGCCTGA
PROTEIN sequence
Length: 1270
VLDVNAFDKIRIGLATADDIRGWSHGEVKKPETINYRTLKPEKDGLFGEQIFGPTRDWECACGKYKRVRFKGIVCERCGVEVTRSRVRRERMGHIELAAPVTHIWFFKGVPSRLGYLLNVTPKDLERVIYFASYMVTEVNEDERHNDLPGLQDEFDSEIKRLEQRRDSDIEARAKKVEEDLAALEEAGEAKGPARTKLRNGAERDMAAIRTRYNDQIARVDAVFDKFKKLKPGDMVDDVDLWREMQDRYGDYFDGCMGAEAIKKRLQSLDLETISKELREEIKDASEQRKTKALKRLKVVNAFLTTGNKPEAMVLDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIELGAPEIMLNNEKRMLQEAVDSLFDNGRRGRPVTGASNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPSLRMHQCGLPKPMALELFKPFVIKRLVDLNYAQNMKSAKRLVDRGDAEVWGVLEEVISEHPVLLNRAPTLHRLGIQAFEPILVEGKAIHLPPLACAAFNADFDGDQMAVHLPLSAEAQAEARSLMMASDNILKPADGHTVTMPSQDMILGLYYLSTVLEGVKGQGRVFSSLEEAEMALDRHEIDMQAKVLIRLPESFVLPKNWEPGEVKVLDPREGEDEVVKEERFHDGTVLFATSYGRILFNETLPTDYPFVNEQVAKGRLSKIVDDIAMRYSTQQVAATLDALKDLGFTRAPWSGVSFAFSDVNEPPERDEKIAEYEAKADKVNANYEMGLLTEEARRQELIDLWTECTAEVSKEVEEKFDPTSNLAIIVQSGARGNMMQINQIAGMRGLVANPKGEIIPRPVKSNYRDGLSVLEYFISQHGARKGLADTALRTAESGYLTRRLVDVSQDVIVREEDCGTKAGLPIRVAERDNDGNLVLVKAADGGPYSRLLAADVIDPADGQTVLYKRDDALSMDVLNDLVAHGVEEVKCRSVLTCESKRGVCAKCYGWSLATNKLVDVGETVGIVAAQSIGEPGTQLTLRSFHSGGVAAASDITQGLPRVTELFEARTPKGEAPITEFAGSIKIVENDRGRQIILTPDADSGAPKEDGVIKPITYQVSKRVPLKVADGDHIKVGTQLVEGSVDPKKILTILGKRAAQVNIVEEVHTVYRSQGVDIHDKHIEVIVHQMTRRVTIIDSGDTDLLPGELVDNARFREINRNIVKNGGRPAVGRPALMGITKASLATDSWLSAASFQETTRVLTEAALSEKVDDLKGLKENVIIGKLLRSGRSA*