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L2_023_000G1_scaffold_107_32

Organism: L2_023_000G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 21 / 38 MC: 17
Location: comp(34007..34570)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor (Possible RNA polymerase sigma-24 factor) n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11YG2_CYTH3 similarity UNIREF
DB: UNIREF100
  • Identity: 48.1
  • Coverage: 162.0
  • Bit_score: 160
  • Evalue 1.10e-36
Uncharacterized protein {ECO:0000313|EMBL:ETZ19087.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.3
  • Coverage: 181.0
  • Bit_score: 166
  • Evalue 2.70e-38
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 162.0
  • Bit_score: 160
  • Evalue 3.00e-37

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Taxonomy

Pedobacter sp. V48 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 564
ATGTCTGACAAAACAACATTAGCTTTTAATGTCAATAAGATGGATAATAGTTTCATTGAGTTCGAAGCTGTCTATAATCTGTATTGGAAAAAGCTATATTCTATTTGTTATAAGAGTATTGAAGATCCGGATATAGCAAAAGACCTTGTTCAGGATATTTTTATATCGTTGTGGGAAAGACAAGAAGAGTTAATAATCAATGATTCTCTTGAAAGATACCTTGTAAAGGCAGCCAAATTTAAGGTTTTTGAGTATATCAGAAACAAAGTCGGACATGAAACCAAACTGGAAACACTCTCCTATTACCAAACTTTAGAGCAAACAACTTCAAGTCAGGAACTTGTCGAATACAAAGAGTTACAAGAAAGAATCAACTCCGCAATATCGTTACTGCCCGATCATTGTAAGAATGTATTCTTACAGAGCAGGATCGAAGGACTTAAGAATAAAGAAATAGCACAGTCTCTACAGGTCACCGAAAGAACTGTGGAATATCATATAACTAAAGCTTTGGCTCATCTGCGCATCAGATTAAAAGAATATGCACATCTGTTTTTATTCTAA
PROTEIN sequence
Length: 188
MSDKTTLAFNVNKMDNSFIEFEAVYNLYWKKLYSICYKSIEDPDIAKDLVQDIFISLWERQEELIINDSLERYLVKAAKFKVFEYIRNKVGHETKLETLSYYQTLEQTTSSQELVEYKELQERINSAISLLPDHCKNVFLQSRIEGLKNKEIAQSLQVTERTVEYHITKALAHLRIRLKEYAHLFLF*