ggKbase home page

L2_023_000G1_scaffold_1021_29

Organism: L2_023_000G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 21 / 38 MC: 17
Location: comp(15486..16220)

Top 3 Functional Annotations

Value Algorithm Source
truA; tRNA pseudouridine(38-40) synthase (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 69.3
  • Coverage: 244.0
  • Bit_score: 351
  • Evalue 1.20e-94
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171, ECO:0000313|EMBL:AIY83113.1};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 244.0
  • Bit_score: 351
  • Evalue 5.90e-94
tRNA pseudouridine synthase A n=1 Tax=Clostridium colicanis 209318 RepID=N9WCL0_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 66.8
  • Coverage: 244.0
  • Bit_score: 336
  • Evalue 1.80e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium baratii → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 735
ATGAGAAATATAAAGCTAACTATAGAATATGATGGAACAAGCTATGGAGGATGGCAGAAGCAAAAGAATAATAGAACAATTCAACAGTGCATTGAAGAAGCAATTAAGTTGCTTACGGGTGAAGATGTTGAATTAATAGGAAGCTCTAGAACTGACGCTGGCGTTCATGCTAAAGGTATGATTGCAAACTTCATTACTAATAGCCAAATTCCAGCTGATAAATTTAGAGAAGCTATTAATACTAAATTACCAGATGACATAGGAATAATTAAATCTGAAGAAGTTGATAGAAACTTTCATTCAAGATATGATAGTAAAGGTAAAACTTATTGTTATACATTAGTAAATAGATATGAAAAAGTATGTATAGGAAGAAATTATGTATATCAAGTTAGAGATGAATTAAATTATAATCTAATGAAAGAGGCTGCAAAATATTTTTTGGGTAAGCATGACTTTAAGGCCTTTAAAACTAATGGAAGTTCTGTAAAGACTTCAGTAAGAACAATAAATGGATTGGAACTAGAATTAAAAGGTGATGTTATAAAGATATTTGTTAGTGCAGATGGATTTCTTTATAATATGGTAAGAATTATAGTAGGTACTTTAATTGAAGTTGGAAAAGGAAAAATAAAACCAGAAGATATAGAGAGTATAATAAAAAACGGAGATAGAAGTAAGGCAGGACCTTGTGTACCACCTAATGGATTAGTATTAGAAAAAGTTTTTTATTAA
PROTEIN sequence
Length: 245
MRNIKLTIEYDGTSYGGWQKQKNNRTIQQCIEEAIKLLTGEDVELIGSSRTDAGVHAKGMIANFITNSQIPADKFREAINTKLPDDIGIIKSEEVDRNFHSRYDSKGKTYCYTLVNRYEKVCIGRNYVYQVRDELNYNLMKEAAKYFLGKHDFKAFKTNGSSVKTSVRTINGLELELKGDVIKIFVSADGFLYNMVRIIVGTLIEVGKGKIKPEDIESIIKNGDRSKAGPCVPPNGLVLEKVFY*