ggKbase home page

L2_023_000G1_scaffold_2563_2

Organism: L2_023_000G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 21 / 38 MC: 17
Location: 236..1267

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 343.0
  • Bit_score: 677
  • Evalue 8.60e-192
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XUN4_9BIFI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 343.0
  • Bit_score: 677
  • Evalue 6.10e-192
16S rRNA methyltransferase similarity KEGG
DB: KEGG
  • Identity: 98.5
  • Coverage: 343.0
  • Bit_score: 668
  • Evalue 8.00e-190

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium catenulatum → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1032
ATGACAGATGTGACAACGATTCATCAGCCAGTGTTGCTGCGTGACTGCGTGGATCTGGTGGCGCCTGCATTGGCGAATCCGGGGTCGATCGCTGTGGATTGCACGCTTGGCTTGGCCGGGCATTCCACGGCATTCCTTAAAGCGAGCCCGCATGCTCGCCTGATTGGCATCGACCGAGACACTGAGGCCCTTGCGCTTGCCACGCAGCGAATGCAGATGGAAGGACTTGCCGATCGCTTCATACCTGTGCATGCCGCATTCGACGATTTCGCGCAAGTGCTTGATGATCAGGGAATCGATCAAGTGAATGCCGTGTTCATGGATTTGGGATTGTCAAGTCTGCAGATCGATGAGACGGAGCGGGGATTCTCGTATTCCCACGATGCGCCTTTGGACATGCGTATGGACGTGACCCAGCCATTGACCGCTGAGCAGGTGCTTGCCGATTATTCGTTTGCTGATTTGGCGCGCATTTTCCGTACGTATGGTGAAGAACGTTTCTCCAAGCAGATCGCCCGTGCAATCGTGCGTAGGCGTGAGATCGAGCCGTTGACCACATCAGGGCAGCTTAACCGTCTTGTGGATGAGGTTGTGCCGCAGGCGCACCGTCCTGCAGGAAATCCTGCCAAACGAGTGTTCCAAGCGCTGCGTATCGAAGTCAATGGTGAGCTCGACAAATTGGCGGGGACATTGCCCCAGATCGCCAACCATCTCGCGGTGGGAGGGCGTTTGGTGGTGGAGTCGTACCATTCGCTGGAAGACAAAACCGTCAAAACATTCATGAATCAAGGTCTGAAAGCTGACGTGCCTGCGGACATGCCGGTAATTCCGCCGGATATGATGCCGTTCTTCAAGGAACTCACGCGAGGCGCTATCAAAGCTGGCGACGAGGAAATCGCCATGAATCCGAGGTCGGCTTCCGTACGATTGCGTGCAGTGGAACTGACCAGACCGATTCCCGAACGCTGGCGAAAACGATTCGAACAGGGCAATGACTACGCAAGCATGAAACGACAAGGAAGGAGGGGCTGA
PROTEIN sequence
Length: 344
MTDVTTIHQPVLLRDCVDLVAPALANPGSIAVDCTLGLAGHSTAFLKASPHARLIGIDRDTEALALATQRMQMEGLADRFIPVHAAFDDFAQVLDDQGIDQVNAVFMDLGLSSLQIDETERGFSYSHDAPLDMRMDVTQPLTAEQVLADYSFADLARIFRTYGEERFSKQIARAIVRRREIEPLTTSGQLNRLVDEVVPQAHRPAGNPAKRVFQALRIEVNGELDKLAGTLPQIANHLAVGGRLVVESYHSLEDKTVKTFMNQGLKADVPADMPVIPPDMMPFFKELTRGAIKAGDEEIAMNPRSASVRLRAVELTRPIPERWRKRFEQGNDYASMKRQGRRG*