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L2_023_000G1_scaffold_54542_3

Organism: L2_023_000G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 21 / 38 MC: 17
Location: 794..1006

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 71.0
  • Bit_score: 143
  • Evalue 9.20e-32
transcription-repair coupling factor (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 70.0
  • Bit_score: 85
  • Evalue 3.50e-15
Transcription-repair-coupling factor n=1 Tax=Clostridium nexile CAG:348 RepID=R6PNN2_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 71.0
  • Bit_score: 143
  • Evalue 6.60e-32

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Taxonomy

Clostridium nexile CAG:348 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 213
ATGCAGTTTTTTGCAGGACCGCTGAAAGAATTGGCGGAGTATGAAGAGATTCAGAAAAAAAGAACGGAAAAGCAGGGAATGATACAGATATCAGGTTGTGTCACTTCCCAGAAAACACATTTGATGTATGCGCTGGGCGATGGTTTTAAACGAAAAATCATCGCTGTTTCCAGTGAGCTCAAGGCAAAACAAATTTATGAAGAGTACCGTTTT
PROTEIN sequence
Length: 71
MQFFAGPLKELAEYEEIQKKRTEKQGMIQISGCVTSQKTHLMYALGDGFKRKIIAVSSELKAKQIYEEYRF