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L2_023_000G1_scaffold_86_6

Organism: dasL2_023_000G1_concoct_62_fa

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 14 / 38
Location: 5536..9126

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1358 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 1196.0
  • Bit_score: 2377
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=19 Tax=Lactococcus RepID=RPOB_LACLA similarity UNIREF
DB: UNIREF100
  • Identity: 99.9
  • Coverage: 1196.0
  • Bit_score: 2376
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase, beta chain similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 1196.0
  • Bit_score: 2377
  • Evalue 0.0

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Taxonomy

Lactococcus lactis → Lactococcus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3591
TTGGCAGGACATGACGTAAAATACGGTAAACACCGTACAAGACGCAGTTTTTCACGTATTAAAGAAGTAATCGGTTTGCCAAACCTCATCGAAGTTCAAACATTAAGTTATAAAAACTTCCTCGATGAAGGTCTTGCAAATGTCTTCAAAGAAATGTTTCCAATCGACAACTTTGCGGGTACAATGGAACTCGAATTTGTTGGTTATGAAATGAAAACCCCAAAATACACTGTTGAAGAAGCTCGCGCACATGACGCAAACTATTCAGCACCTATCTATGTAACCTTCCGTCTTGTAAATAAAGAAACTGGTGAATTAAAAACACAAGAAGTCTTCTTTGGTGACTTCCCACTCATGACTGAAATGGGGACATTTATCAATAACGGTTCAGAACGTTTGATCGTTAGCCAATTGGTACGTAGTCCTGGTTCATACTTCCATCTTAAAGCTGATAAAAACGGTCTTGAAAGTTTTGGACATACAACAATTCCTAACCGTGGAGCTTGGTTTGAGTTAGATACAGATGCTAAAGGCATTGGTTATGTTCGTATTGACCGTACACGTAAATTAACTTTTACAACTATGCTTCGTGCGCTTGGTTTTGGTTCAGATGAAGAAATCCTTGAATTGTTGGGAGAAACTCAACTTTTAACAGACACTATTGCAAAAGATGTTCATAAAAACCCAGCTGACACTCGTGTAGAAGAAGCGCTCAAAGACATCTATGACCGCTTGCGTCCAGGAGAACCTAAAACAGCAGATAGCTCACGTGGCTTGCTTGTTGCTCGTTTCTTCGATCCAAAACGTTATGACTTCGCACCTGTTGGACGTTACAAATTTAACAAGAAATTAGCGCTTAAAAATCGTTTGCTTGGATTGACCTTGGCTGAACCAATTGTTGACCCAGAAACTGGTGAAATTCTTGTTAATACAGATACTCTTGTTACTCGTGATGTGCTTGATTTAATCGAACCATTGCTTGATAACGGTCTTGGAAACTTTGTTGTTGAACCATCTGACGACGCTGTAATTCCAGAACCAATTACTTTGCAAAGTATCAAAGTTTATTCACCTAAAGATCCAGAACGTGTTGTTACATTACTCTCAAATGGTAATCCTGATGCGGAATGCCGTGTCTTGACACCAGCCGATGTGATTTCAAATATCAGCTACTGGCTTGGTCTTGCTGAAGGAATTGGTAAAGTAGACGATATTGACCACTTAGGTAACCGTCGTATCCGTTCAGTAGGTGAATTGCTTCAAAACCAAGTACGTATCGGACTTTCACGTATGGAACGTGTTATTCGCGAACGTATGTCATCTTCAGAAAATGAAAATATCACACCACAAGGTTTGATTAACATTCGCCCTGTAACAGCTTCAATTAAAGAATTCTTTGGTTCATCACAATTGTCACAATTTATGGACCAACACAATCCTTTATCTGAGCTTTCACACAAACGTCGTTTTTCTGCCTTAGGGCCTGGTGGTATCTCACGTGACCGTGCTTCATATGAAGTACGTGACGTTCACTATACTCACTATGGCCGTATGTGTCCTATTGAAACACCTGAAGGACCAAACATCGGTTTGATTAACAACTTGTCATCATATGCCAAAGTAAACGAATATGGTTTCATCATGTCACCATACCGTCGTGTTGACCGTGTGAACGGTGTGGTTACTGACGAAGTTGAATATTTAACTGCCGATGAAGAAGACAACTATACTGTTGCCCAAGCAAACTCACCATTGACTGAAGATAGCCGCTTTGCTAACGAAACAGTTATGGCTCGTCATACTGGTAACAATATTGAAGTTGAAGCTTCAACAGCAGACTATATGGACGTTTCACCTAAACAGGTTATCGCCGTTGCTGCTGCATGTATTCCATTCTTGGAAAACGATGACTCCAACCGTGCCCTCATGGGTGCCAACATGCAACGTCAAGCAGTTCCATTGATTGACCCACATGCACCTTGGATTGGTACTGGTATGGAACATCAAACTGCTCGTGACTCAGGTGCTGCACTTCTTGCAAAACATGCTGGTGTTGTTGAGTATGTTGATGGTAATGAAATTCGTGTTCGTCGTACTTCTGGTGAACTTGATATTTATAATATTACAAAATATCGTCGTTCAAACTCAGGAACTTCGTATAACCAACGTCCATTGGCTCGACTTGGAGAAAAAGTTGAGAAAGGGGACATCATTGCTGATGGACCTTCTATGGAAAATGGAGAAATGGCCCTTGGTCAAAATCCACTTGTTGCTTATATGACTTGGGAAGGTTATAACTTCGAGGATGCGGTAATTATGTCAGAACGTTTGATTAAAGACGACGTTTATACATCAATTGCCATCGAAGAATATGAATCAGAAACACGCGATACAAAACTTGGCCCTGAAGAAATTACTCGTGAAATTCCAAACGTTGGGGATGAAGCACTCAAAAACCTTGATGAATCAGGAATTATCCGTATTGGTGCTGAAGTTAAAGATGGCGACTTGCTTGTTGGTAAAGTAACTCCTAAAGGTGAAACTGATCCAACACCAGAAGAACGTTTGCTTCGTGCAATCTTTGGTGAAAAAGCTCGTGAAGTTCGTGATACATCACTTCGTGTTCCTCACGGAGGTGGCGGTATTGTTCATGATGTTCGTGTATTTACACGCGAAAATGGTGATGAATTGCCATCAGGTGTGAATAAACTTGTTCGTGTCTTCATTGCTCAAAAACGTAAGATTCACGTTGGGGATAAAATGGCCGGACGTCATGGTAATAAAGGGGTTGTTTCAAATATCGTTCCAATGGAAGATATGCCTTACTTACCAGATGGAACACCTATTGATATCATGTTGAACCCACTTGGGGTACCATCACGTATGAATATCGGACAAGTTATGGAGCTCCATTTAGGTATGGCTGCTCGTACACTTGGAATTCACATTGCAACTCCAGTGTTTGATGGAGCATCTGATGAAGATATCTGGGATACCGTTAAAGAAGCTGGAATGGCTGATGATGCGAAAACAGTTCTTTATGACGGACGTACTGGTGAACCATTTGATAACCGAATTTCAGTCGGTGTCATGTATATGATTAAACTTCATCACATGGTTGATGACAAACTCCATGCTCGTTCAGTTGGTCCTTACTCACTCGTTACACAACAACCGCTCGGTGGTAAAGCGCAGTTCGGTGGACAACGTTTTGGGGAAATGGAAGTTTGGGCCCTTGAAGCCTATGGTGCTGCCAATGTTCTTCAAGAAATCTTGACTTACAAATCAGATGACGTGATTGGACGTACGCGCGCTTATGAAGCTATTGTTAAAGGTGAACGTATTCCTAAACCAGGTCTTCCTGAATCATTCCGCGTATTGGTTAAAGAGCTACAATCACTTGGTCTTGATATGAAAGTCCTTGATGCTGACCGTAATGTTCTTGACTTACGTGAATTGGATGAAGATGAAGTAATGACTCGTCCAGATAATACAGAAATTACTCCTGAAATGCTTGAAGCACAGGAAGCTATTGTTGCACAAGCAGAAGCTGAAGAAGAAGCTTTGATTAACGCTGATACTGAAAAATAA
PROTEIN sequence
Length: 1197
LAGHDVKYGKHRTRRSFSRIKEVIGLPNLIEVQTLSYKNFLDEGLANVFKEMFPIDNFAGTMELEFVGYEMKTPKYTVEEARAHDANYSAPIYVTFRLVNKETGELKTQEVFFGDFPLMTEMGTFINNGSERLIVSQLVRSPGSYFHLKADKNGLESFGHTTIPNRGAWFELDTDAKGIGYVRIDRTRKLTFTTMLRALGFGSDEEILELLGETQLLTDTIAKDVHKNPADTRVEEALKDIYDRLRPGEPKTADSSRGLLVARFFDPKRYDFAPVGRYKFNKKLALKNRLLGLTLAEPIVDPETGEILVNTDTLVTRDVLDLIEPLLDNGLGNFVVEPSDDAVIPEPITLQSIKVYSPKDPERVVTLLSNGNPDAECRVLTPADVISNISYWLGLAEGIGKVDDIDHLGNRRIRSVGELLQNQVRIGLSRMERVIRERMSSSENENITPQGLINIRPVTASIKEFFGSSQLSQFMDQHNPLSELSHKRRFSALGPGGISRDRASYEVRDVHYTHYGRMCPIETPEGPNIGLINNLSSYAKVNEYGFIMSPYRRVDRVNGVVTDEVEYLTADEEDNYTVAQANSPLTEDSRFANETVMARHTGNNIEVEASTADYMDVSPKQVIAVAAACIPFLENDDSNRALMGANMQRQAVPLIDPHAPWIGTGMEHQTARDSGAALLAKHAGVVEYVDGNEIRVRRTSGELDIYNITKYRRSNSGTSYNQRPLARLGEKVEKGDIIADGPSMENGEMALGQNPLVAYMTWEGYNFEDAVIMSERLIKDDVYTSIAIEEYESETRDTKLGPEEITREIPNVGDEALKNLDESGIIRIGAEVKDGDLLVGKVTPKGETDPTPEERLLRAIFGEKAREVRDTSLRVPHGGGGIVHDVRVFTRENGDELPSGVNKLVRVFIAQKRKIHVGDKMAGRHGNKGVVSNIVPMEDMPYLPDGTPIDIMLNPLGVPSRMNIGQVMELHLGMAARTLGIHIATPVFDGASDEDIWDTVKEAGMADDAKTVLYDGRTGEPFDNRISVGVMYMIKLHHMVDDKLHARSVGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAANVLQEILTYKSDDVIGRTRAYEAIVKGERIPKPGLPESFRVLVKELQSLGLDMKVLDADRNVLDLRELDEDEVMTRPDNTEITPEMLEAQEAIVAQAEAEEEALINADTEK*