ggKbase home page

L2_023_126G1_scaffold_29

Search features with annotation key words

Displaying items 61-90 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_126G1_scaffold_29_61
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

77879..78715
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YXY7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87780.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
putative short-chain dehydrogenase
L2_023_126G1_scaffold_29_62
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(78985..79722)
DNA (738bp) protein (246aa)
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AHP0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ93315.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L2_023_126G1_scaffold_29_63
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

80097..80972
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A778_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ93305.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
RpiR family transcriptional regulator
L2_023_126G1_scaffold_29_64
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(81099..81749)
DNA (651bp) protein (217aa)
DNA-binding response regulator n=2 Tax=Clostridium butyricum RepID=M8K0K1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32282.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
two component transcriptional regulator, LuxR family
L2_023_126G1_scaffold_29_65
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(81839..83032)
DNA (1194bp) protein (398aa)
UPI0003D5D381 related cluster n=1 Tax=unknown RepID=UPI0003D5D381
Uncharacterized protein {ECO:0000313|EMBL:KJZ84055.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
integral membrane sensor signal transduction histidine kinase
L2_023_126G1_scaffold_29_66
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

83204..84490
DNA (1287bp) protein (429aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JF81_CLOBU
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ENZ32280.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
RND family efflux transporter MFP subunit
L2_023_126G1_scaffold_29_67
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

84503..87604
DNA (3102bp) protein (1034aa)
Acriflavin resistance protein n=2 Tax=Clostridium butyricum RepID=M8J4Y3_CLOBU
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:ENZ32279.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
nolG3; nodulation protein NolG
L2_023_126G1_scaffold_29_68
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

87839..88477
DNA (639bp) protein (213aa)
Nitroreductase n=2 Tax=Clostridium butyricum RepID=M8K8N3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84030.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
nitroreductase
L2_023_126G1_scaffold_29_69
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(88519..88956)
DNA (438bp) protein (146aa)
MarR-family transcriptional regulator n=2 Tax=Clostridium butyricum RepID=M8K0K8_CLOBU
Transcriptional regulator, MarR family {ECO:0000313|EMBL:KJZ84046.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
MarR family transcriptional regulator
L2_023_126G1_scaffold_29_70
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

89171..90319
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YXD6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32276.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
copper amine oxidase family protein,putative cell wall binding protein
L2_023_126G1_scaffold_29_71
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

90869..91846
DNA (978bp) protein (326aa)
PTS system, mannose-specific IIB component/PTS system, mannose-specific IIA component {ECO:0000313|EMBL:KJZ84034.1}; EC=2.7.1.69 {ECO:0000313|EMBL:KJZ84034.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Pts system mannose-specific eiiab component n=4 Tax=Clostridium butyricum RepID=B1R0Q8_CLOBU
PTS system sorbose subfamily transporter subunit IIB
L2_023_126G1_scaffold_29_72
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

91880..92686
DNA (807bp) protein (269aa)
PTS system sorbose-specific iic component n=2 Tax=Clostridium butyricum RepID=M8J4Y9_CLOBU
PTS system, mannose-specific IIC component {ECO:0000313|EMBL:KJZ84033.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
PTS system sorbose-specific transporter subunit IIC
L2_023_126G1_scaffold_29_73
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

92705..93616
DNA (912bp) protein (304aa)
IIDman n=4 Tax=Clostridium butyricum RepID=B1R0R0_CLOBU
PTS system, mannose/fructose/sorbose family, IID component {ECO:0000313|EMBL:ENZ32273.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
PTS system mannose/fructose/sorbose family transporter subunit IID
L2_023_126G1_scaffold_29_74
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

93821..94195
DNA (375bp) protein (125aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R0R1_CLOBU
Putative regulator of the mannose operon, ManO {ECO:0000313|EMBL:KJZ84037.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_023_126G1_scaffold_29_75
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

94472..95971
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YXD4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32271.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
penicillin-binding protein
L2_023_126G1_scaffold_29_76
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

95952..96443
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YXD4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32271.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
beta-lactamase
L2_023_126G1_scaffold_29_77
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

96462..97145
DNA (684bp) protein (228aa)
Regulatory protein VanR n=1 Tax=Clostridium botulinum (strain Loch Maree / Type A3) RepID=B1KTN7_CLOBM
regulatory protein VanR
Regulatory protein VanR {ECO:0000313|EMBL:ACA55807.1}; TaxID=498214 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Loch Maree / Type A3).;"
L2_023_126G1_scaffold_29_78
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

97171..98229
DNA (1059bp) protein (353aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AHM7_CLOBU
two-component sensor histidine kinase
L2_023_126G1_scaffold_29_79
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(98297..99193)
DNA (897bp) protein (299aa)
Permease, DMT family n=2 Tax=Clostridium butyricum RepID=M8K8P7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32268.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
protein of unknown function DUF6 transmembrane
L2_023_126G1_scaffold_29_80
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(99492..100829)
DNA (1338bp) protein (446aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AJH7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32267.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Histidine kinase, HAMP region:chemotaxis sensory transducer precursor
L2_023_126G1_scaffold_29_81
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

101078..101287
DNA (210bp) protein (70aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=N9YXD0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32266.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
FeoA family protein
L2_023_126G1_scaffold_29_82
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

101322..101543
DNA (222bp) protein (74aa)
Ferrous iron transport protein A n=3 Tax=Clostridium butyricum RepID=C4IBY1_CLOBU
Ferrous iron transport protein A {ECO:0000313|EMBL:KJZ84157.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_023_126G1_scaffold_29_83
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

101661..103811
DNA (2151bp) protein (717aa)
Ferrous iron transport protein B n=2 Tax=Clostridium butyricum RepID=M8J504_CLOBU
Ferrous iron transporter B {ECO:0000313|EMBL:ENZ32264.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ferrous iron transport protein B
L2_023_126G1_scaffold_29_84
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

104038..104214
DNA (177bp) protein (59aa)
UPI0003D67CDB related cluster n=1 Tax=unknown RepID=UPI0003D67CDB
Uncharacterized protein {ECO:0000313|EMBL:KJZ91759.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
L2_023_126G1_scaffold_29_85
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

104543..105460
DNA (918bp) protein (306aa)
Ribokinase n=2 Tax=Clostridium butyricum RepID=M8JDR0_CLOBU
Ribokinase {ECO:0000313|EMBL:ENZ32262.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
rbsK; ribokinase
L2_023_126G1_scaffold_29_86
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

105477..105872
DNA (396bp) protein (132aa)
D-ribose pyranase {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00011477}; EC=5.4.99.62 {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00166232};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
D-ribose pyranase n=2 Tax=Clostridium butyricum RepID=M8JF31_CLOBU
D-ribose pyranase
L2_023_126G1_scaffold_29_87
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

105886..107394
DNA (1509bp) protein (503aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Ribose import ATP-binding protein RbsA n=3 Tax=Clostridium butyricum RepID=B1R1N5_CLOBU
ABC transporter related protein
L2_023_126G1_scaffold_29_88
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

107415..108347
DNA (933bp) protein (311aa)
UPI0003D5FECE related cluster n=1 Tax=unknown RepID=UPI0003D5FECE
Ribose transport system permease protein RbsC {ECO:0000313|EMBL:ETI87677.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
rbsC; ribose ABC transporter permease
L2_023_126G1_scaffold_29_89
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

108474..109382
DNA (909bp) protein (303aa)
D-ribose-binding protein n=3 Tax=Clostridium butyricum RepID=B1R1N3_CLOBU
Ribose ABC transport system, periplasmic ribose-binding protein RbsB {ECO:0000313|EMBL:KJZ84140.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ribose ABC transporter periplasmicD-ribose-binding protein
L2_023_126G1_scaffold_29_90
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

109434..109721
DNA (288bp) protein (96aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
fructose-6-phosphate aldolase, TalC/MipB family (EC:2.2.1.2)
Probable transaldolase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDR6_CLOBU
Displaying items 61-90 of 90 in total

View Taxonomy