ggKbase home page

L2_023_126G1_scaffold_6003_3

Organism: L2_023_126G1_public_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 16
Location: comp(1360..2280)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=2 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAF1_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 306.0
  • Bit_score: 592
  • Evalue 1.40e-166
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 306.0
  • Bit_score: 592
  • Evalue 1.90e-166
RNA polymerase, sigma 70 subunit, rpod subfamily similarity KEGG
DB: KEGG
  • Identity: 61.1
  • Coverage: 303.0
  • Bit_score: 360
  • Evalue 2.50e-97

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Intestinibacter bartlettii → Intestinibacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 921
ATGATGCTAAATAACAATTCGATAGGAATAAATAAGGTGAAGGAATCTGATATTTCGCTAGAAGGCAACTCTAATAACCTCGTCAACTTAGATGATTCGATGAAAATTTATTTAAAAGAAATAGGAAAAATACCACTCTTGAGTAGACAAGAAGAATTAGATATTGCAAAGAGGATTTGTGAAGGAGATGAAGTAGCAAAAAAAATATTAGTAGAATCAAATCTTAGGTTAGTTGTAAGCATAGCTAGGAAATATGCAAGAAAAGAGATGGCTATGTTAGATTTGATTCAAGAAGGAACACTAGGTCTTATAAGGGCAGCAGAGAAATTTGACTATACAAAAGGATTTAAATTTAGCACATATGCAACATGGTGGATTAAACAGGGAATAACTCGTGCCATAGCAGATCAATCGAGAACAATAAGAGTACCCGTTCACATGGTAGAAAAAATAAATAAAGTATCTACAATATCATCACAACTAGCAAAAGAGTTAGGACGTGAACCTAAACCAGAAGAAATCGCAAAAAGAATGCATGTACCAGTAGAAAAAGTAGTCCAAGTTATAAGAATATCACAAAGACCACAATCAATAGAATCGACAATTGGACAAGAAGATGACACAGAATTAGAACAAGTAATACCAGACAAAGAAGCGCACTCACCAGAAGAAATAGTCACAAGATCACTTCTAAAAGACCAAATAGAATACGTATTAGATACATTGAGCGAAAGAGAAAAAGGAGTAATAAAACTAAGATTTGGGCTTGGCGATGGTGAGAAAAAGACACTAGAAGAAGTCGGCAGAGCATTTAATGTTACAAGAGAAAGAGCGAGACAAATCGAGAAAAAGGCGTTGAGAAAACTGGCTCACCCAAGCAGATCTAACAAGCTTTTGGATTATTATTATGATATATGTTAG
PROTEIN sequence
Length: 307
MMLNNNSIGINKVKESDISLEGNSNNLVNLDDSMKIYLKEIGKIPLLSRQEELDIAKRICEGDEVAKKILVESNLRLVVSIARKYARKEMAMLDLIQEGTLGLIRAAEKFDYTKGFKFSTYATWWIKQGITRAIADQSRTIRVPVHMVEKINKVSTISSQLAKELGREPKPEEIAKRMHVPVEKVVQVIRISQRPQSIESTIGQEDDTELEQVIPDKEAHSPEEIVTRSLLKDQIEYVLDTLSEREKGVIKLRFGLGDGEKKTLEEVGRAFNVTRERARQIEKKALRKLAHPSRSNKLLDYYYDIC*