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L2_026_000M1_scaffold_4069_9

Organism: dasL2_026_000M1_concoct_38_sub_fa

partial RP 36 / 55 MC: 3 BSCG 40 / 51 MC: 5 ASCG 12 / 38 MC: 1
Location: comp(4080..5039)

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase, alpha subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 319.0
  • Bit_score: 622
  • Evalue 6.20e-176
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059, ECO:0000313|EMBL:CCO05613.1};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 319.0
  • Bit_score: 622
  • Evalue 3.00e-175
DNA-directed RNA polymerase subunit alpha n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T4G5_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 319.0
  • Bit_score: 622
  • Evalue 2.20e-175

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Taxonomy

Ruminococcus bicirculans → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 960
ATGCTTGAAAAAATAGAAAAGCCTGAAATCGAAACAGCCGAGCTAAAGAGCAACGGAACATACGGCAAGTTTATTCTCGAGCCTCTGGAGCGTGGCTATGGTATTACGCTCGGAAATAGTCTGAGACGTGTACTGCTCTCCTCTTTGCCAGGCGTCGCCGTTACATCGGTAAAGATCGACGGTGTACACCACGAACTATCAACAATTCCCGGAGTTAAGGAAGATGTTACTGAGATCATTCTTAACCTCAAGGGTTTAACTGCAAAGCTTTACGGCGAGGGTCCTAAGACTATCTACATTGAGGCCGAGGGCGAGTGCGTTGTCACTGCCGGCGACATCAAGACAGATTCTGAGGTGGACATTCTTGTTCCTGATATGCACATTGCAACTTTGGGACCGGGCGCAAAGCTTTATATGGAAATTGTCATCGACAGAGGTCGTGGATATGTTTCTGCGGAAAAGAACAAGGCGCTTATGCCTAACGCCCCTATTGGTGTTATTGCAGTAGACAGTATTTATACGCCTGTATTAAAGGTGAACTTCACGGTTGACAACACCCGTGTTGGACAGATCACCGATTTTGATAAGCTTACATTGGAGGTTTGGACCGACGGTACTATCTCCGCTAAGGAAGCTGTATCAATGGCAGCCAAACTCCTCAACGAGCATCTGAATCTCTTTGTTGATCTCTCAGAAGAGACTAACGTTGTAGAGATGATGGTTGAAAAGGATGAAAAGGGCAAGGAAAAGATCCTTGAGATGACCATTGAGGAACTTGACTTATCTGTGCGTTCATTTAACTGTCTGAAGCGTGCAGGAATTAACACGGTTAACGATTTGATTGAAAAGTCTGCTGAAGAAATGATGAAGGTAAGAAACCTTGGTAAGAAGTCATTCGACGAGGTCAAGGAAAAGCTTCATTCATTGGGTTACGACCTTAATTCAGAGGACGATAATTAA
PROTEIN sequence
Length: 320
MLEKIEKPEIETAELKSNGTYGKFILEPLERGYGITLGNSLRRVLLSSLPGVAVTSVKIDGVHHELSTIPGVKEDVTEIILNLKGLTAKLYGEGPKTIYIEAEGECVVTAGDIKTDSEVDILVPDMHIATLGPGAKLYMEIVIDRGRGYVSAEKNKALMPNAPIGVIAVDSIYTPVLKVNFTVDNTRVGQITDFDKLTLEVWTDGTISAKEAVSMAAKLLNEHLNLFVDLSEETNVVEMMVEKDEKGKEKILEMTIEELDLSVRSFNCLKRAGINTVNDLIEKSAEEMMKVRNLGKKSFDEVKEKLHSLGYDLNSEDDN*