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L2_026_000M1_scaffold_7437_8

Organism: dasL2_026_000M1_concoct_38_sub_fa

partial RP 36 / 55 MC: 3 BSCG 40 / 51 MC: 5 ASCG 12 / 38 MC: 1
Location: comp(3611..4495)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U631_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 280.0
  • Bit_score: 547
  • Evalue 4.80e-153
rpoD; RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 280.0
  • Bit_score: 547
  • Evalue 1.40e-153
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 280.0
  • Bit_score: 547
  • Evalue 6.70e-153

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Taxonomy

Ruminococcus bicirculans → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 885
ATGACAGACAAGAAACAGATACTTGATAACCTTATGGAACACGGCAAAACTACAGGCAAGCTCACTACAAAAGAGATAACTGACGCTCTTGAAAAGCTCGACTATGACGTCGAGCAAATGGACAGCTTCTATGATAGCTGTGCCGCAAATAATATTGAGATAATTGATGATATCATCACCGACGACAGCCTTGACATGGTAAACCCAGAAGACGATCTGGATCAGGACGGCGTTGATATTTCCCTTTCAACTTACGGGATCGCTATCGACGACCCGGTTAAGATCTACCTTAAGGAAATAGGCAGAGTGCCGCTTCTTACCTCCGAGGAGGAGATACAGCTTGCAGAAAAGATGTCTAGCGGCAATGAAAAGGACGCTAAAAAAGCAAGAAAAAGACTGGCAGAAGCAAACCTCAGACTTGTTGTTTCTATCGCAAAGAAATATGTGGGCAGAGGAATGAGCTTCCTTGACCTTATCCAGGAAGGCAACATGGGTCTTATCAAAGCCGTTGAAAAATTCGACTATACAAAGGGCTTCAAATTCTCCACATATGCCACATGGTGGATAAGACAGGCTATAACAAGAGCGATTGCCGATCAGGCAAGAACTATCAGAATACCTGTACACATGGTAGAAACTATCACAAAGGTAAAGAAAGTATCCTCACAGCTTCTCCACAAGAACGGTCATGATCCGTCACCTGAGGAAATAGCAAAAGAGCTTGATATGAGCGTTGAAAGAGTAAGAGAGATAATGCGTATCGCTCAGGACCCTGTTTCTCTTGAAACACCTATCGGTGAGGAGGAGGACTCACATCTTGGCGACTTTATCCCTGATGATTACAGAGAGAGAAGAGAAGGTGCTCAGACTGCGTTTTGGTCTTGA
PROTEIN sequence
Length: 295
MTDKKQILDNLMEHGKTTGKLTTKEITDALEKLDYDVEQMDSFYDSCAANNIEIIDDIITDDSLDMVNPEDDLDQDGVDISLSTYGIAIDDPVKIYLKEIGRVPLLTSEEEIQLAEKMSSGNEKDAKKARKRLAEANLRLVVSIAKKYVGRGMSFLDLIQEGNMGLIKAVEKFDYTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETITKVKKVSSQLLHKNGHDPSPEEIAKELDMSVERVREIMRIAQDPVSLETPIGEEEDSHLGDFIPDDYRERREGAQTAFWS*