ggKbase home page

L2_026_000M1_scaffold_5570_2

Organism: dasL2_026_000M1_concoct_38_sub_fa

partial RP 36 / 55 MC: 3 BSCG 40 / 51 MC: 5 ASCG 12 / 38 MC: 1
Location: comp(794..1108)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 4 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TC17_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 104.0
  • Bit_score: 206
  • Evalue 1.20e-50
Sigma-70 region 4 {ECO:0000313|EMBL:CDC65391.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 104.0
  • Bit_score: 206
  • Evalue 1.70e-50
helix-turn-helix protein YlxM/p13 family protein similarity KEGG
DB: KEGG
  • Identity: 36.8
  • Coverage: 95.0
  • Bit_score: 63
  • Evalue 3.60e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcus sp. CAG:57 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 315
ATGCAGCACACAAAGGTATCATACGAGCTTATACAAAACTATATCTCAAGTCCTCGTGTCACTGAGAAAGATAGTCCCGACCCTGCCTCTGCCATAGAAAACAGGCTCATGCGTGAGATAGTGCGGGAAAATTTGACGAAACGGCAGAAATGTTATATAATAATGTATTATACAAAGGGCATGACAATGCAGGAGATAGCCGACGCAGAGGGAGTTTCAAAATCCACAGTATCCAGGACTATCGGGCTTGCAAGAAAGCGAATATCCTGCGGTATGAAGCCTGCCATGCTCAAAAGCGCACTGAAAGGGAGATAG
PROTEIN sequence
Length: 105
MQHTKVSYELIQNYISSPRVTEKDSPDPASAIENRLMREIVRENLTKRQKCYIIMYYTKGMTMQEIADAEGVSKSTVSRTIGLARKRISCGMKPAMLKSALKGR*