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This organism can only be binned in the context of its binning project RIFCSPHIGHO2_01_FULL. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

L2_026_000M1_scaffold_10144_1

Organism: dasL2_026_000M1_concoct_38_sub_fa

partial RP 36 / 55 MC: 3 BSCG 40 / 51 MC: 5 ASCG 12 / 38 MC: 1
Location: 2..661

Top 3 Functional Annotations

Value Algorithm Source
Glycosidase related protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T059_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 219.0
  • Bit_score: 485
  • Evalue 1.70e-134
Glycoside Hydrolase Family 130 protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 219.0
  • Bit_score: 485
  • Evalue 4.70e-135
Glycoside Hydrolase Family 130 protein {ECO:0000313|EMBL:CCO03868.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 219.0
  • Bit_score: 485
  • Evalue 2.30e-134

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Taxonomy

Ruminococcus bicirculans → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 660
AGAGTATGCTTCATCGAAGACAGATATTGGGTAACATGGTGTAATGCATACGGCTGGAAGCCAACTATCGGCGTAGGCTATACATATGATTTCAAGACATTCTATCAGTGTGAGAACGCATTCCTCCCATTCAACAGAAACGGCGTACTCTTCCCAAGAAAGATCGACGGCAAGTATGTAATGTTCTCAAGACCTTCTGATTCAGGTCACACACCATTCGGTGATATGTACATTTCACAGTCACCTGACATGAAGTACTGGGGCGAGCACAGACACGTTATGGGACCTCTCAAGGGCTGGGAGTCCAAGAAGATCGGTGCAGGTCCTATTCCAATAGAGACAGACGAGGGCTGGCTCTGCTTCTATCACGGTGTTCTTGAGTCTTGCAACGGCTTTGTATACAGCTTCTCAGCTTGCATCCTTGACAAGGAGCAGCCATGGAAAGTTAAGTACAGATGCGGCGAGTATCTCATCAACCCAAGAGAGATCTATGAGTGCGTAGGCGACGTTCAGAACGTAACATTCCCATGCGCAACACTTTGCGACGCTGAGACAGGCAGAATTGCTATTTACTACGGCTGTGCTGACACTTGCGTAGGTCTTGCTTACACAACTGTTGACGCTGTTGTTGACTATGTAAAGAGCCATTCTTCTATCTAA
PROTEIN sequence
Length: 220
RVCFIEDRYWVTWCNAYGWKPTIGVGYTYDFKTFYQCENAFLPFNRNGVLFPRKIDGKYVMFSRPSDSGHTPFGDMYISQSPDMKYWGEHRHVMGPLKGWESKKIGAGPIPIETDEGWLCFYHGVLESCNGFVYSFSACILDKEQPWKVKYRCGEYLINPREIYECVGDVQNVTFPCATLCDAETGRIAIYYGCADTCVGLAYTTVDAVVDYVKSHSSI*