ggKbase home page

L2_026_000M1_scaffold_20668_3

Organism: dasL2_026_000M1_concoct_38_sub_fa

partial RP 36 / 55 MC: 3 BSCG 40 / 51 MC: 5 ASCG 12 / 38 MC: 1
Location: 947..1462

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 98.8
  • Coverage: 172.0
  • Bit_score: 344
  • Evalue 1.00e-92
Pseudouridine synthase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZP0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 172.0
  • Bit_score: 347
  • Evalue 5.60e-93
Pseudouridine synthase RluA family {ECO:0000313|EMBL:CDC66658.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 172.0
  • Bit_score: 347
  • Evalue 7.80e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcus sp. CAG:57 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 516
ATGACTGTGACAATAACAAAAGAAGAAAATGAAAAAGCCCTTGAATGTGTACTGCGTTCAAGGGGCTTTTCAAAAAGGCTCATAACAAGGCTCAAACGCACTGAAAACGGCATGACAAGAAAGGGCGTCCTTATCCGCACTGTTGACCTTGTATATGAAAATGACATCATCATGATAAACGAGGGTGACGGTGAAGCTCTTGACCCTAATCCTGACCTGAAAGCTGATATCCTCTATGAGGACAGCGAGGTGGTGGTGTTCTCAAAGCCGCCTTTTATGCCCTGCCACCCGTCAATAAAGCATCGTGACGATACGCTGGGAAATCTTTTTGCCGCACTTTATCCAAGCCTCGCTTTTAGACCTGTCAACCGCCTTGACCGCAACACGAGCGGCTGTGTGCTTGTGGCAAAAAGTCAGCGAAGCGCCGCAATGCTCCAAAAAAGCTTTGAAAAGACCTATGTTGGAATAATAAAAGACCTGCCCCACTGCGGTGGGCGTATCTGTGCGCCTATCGCA
PROTEIN sequence
Length: 172
MTVTITKEENEKALECVLRSRGFSKRLITRLKRTENGMTRKGVLIRTVDLVYENDIIMINEGDGEALDPNPDLKADILYEDSEVVVFSKPPFMPCHPSIKHRDDTLGNLFAALYPSLAFRPVNRLDRNTSGCVLVAKSQRSAAMLQKSFEKTYVGIIKDLPHCGGRICAPIA