ggKbase home page

L2_026_000M1_scaffold_6759_1

Organism: dasL2_026_000M1_concoct_50_fa

near complete RP 47 / 55 MC: 2 BSCG 49 / 51 MC: 5 ASCG 14 / 38
Location: comp(16..423)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BG44_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 83.7
  • Coverage: 135.0
  • Bit_score: 223
  • Evalue 7.30e-56
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDM63255.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.7
  • Coverage: 135.0
  • Bit_score: 223
  • Evalue 1.00e-55
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 135.0
  • Bit_score: 161
  • Evalue 9.60e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Dorea longicatena → Dorea → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 408
ATGGAAATTGGAAAAAAACTAAAAGATGCACGTATAAAATCTGGATTAACTCAAGAAGAAATTGCTGAAAAACTGAATGTTTCTCGTCAAACAATTTCAAATTGGGAAAATGAAAAATCTTATCCAGATATTATAAGTGTGATTGAATTAAGTAGCCTTTATTCCATAAGTCTTGATGATTTATTAAAAGGAGACGAAGAAATGAAAAAACATCTAGAAGAAAGTACAAATGTTGTTAAAAGTAATCAAAAACTTTTTGGAGTCATTCTACTCAATATTGTGATTGTTATTTTATTAATTGCTTTAGGAATGTTTTTACCAAATAAAAGTTATTATTTAATAATAGTATTTTGTTTGGCAATTGTGAGTTCATCACTTTTACTTTATCAAATAATTAAACGTATTTAA
PROTEIN sequence
Length: 136
MEIGKKLKDARIKSGLTQEEIAEKLNVSRQTISNWENEKSYPDIISVIELSSLYSISLDDLLKGDEEMKKHLEESTNVVKSNQKLFGVILLNIVIVILLIALGMFLPNKSYYLIIVFCLAIVSSSLLLYQIIKRI*